Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001102117.1
non-homologous end joining factor IFFO1 [Rattus norvegicus]
...
Query length:
562 aa
DOMAINS: and other(s) domains
...
intermediate filament family orphan 2 isoform X2
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intermediate filament family orphan 2 isoform X2 [Danio rerio]
534 aa protein
accession:XP_021329319.1
intermediate filament family orphan 2 isoform 3
...
intermediate filament family orphan 2 isoform 3 [Mus musculus]
465 aa protein
accession:NP_001411939.1
non-homologous end joining factor IFFO1 isoform X4
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non-homologous end joining factor IFFO1 isoform X4 [Rattus norvegicus]
384 aa protein
accession:XP_063142425.1
non-homologous end joining factor IFFO1 isoform X5
...
non-homologous end joining factor IFFO1 isoform X5 [Rattus norvegicus]
383 aa protein
accession:XP_063142426.1
Query: non-homologous end joining factor IFFO1
...
non-homologous end joining factor IFFO1 [Rattus norvegicus]
562 aa protein
accession:NP_001102117.1
non-homologous end joining factor IFFO1 isoform X7
...
non-homologous end joining factor IFFO1 isoform X7 [Rattus norvegicus]
573 aa protein
accession:XP_063142428.1
DOMAINS: and other(s) domains
...
intermediate filament family orphan 2 isoform X2 [Danio rerio]
534 aa protein
accession:XP_021329319.1
intermediate filament family orphan 2 isoform 3 [Mus musculus]
465 aa protein
accession:NP_001411939.1
non-homologous end joining factor IFFO1 isoform X4 [Rattus norvegicus]
384 aa protein
accession:XP_063142425.1
non-homologous end joining factor IFFO1 isoform X5 [Rattus norvegicus]
383 aa protein
accession:XP_063142426.1
non-homologous end joining factor IFFO1 [Rattus norvegicus]
562 aa protein
accession:NP_001102117.1
non-homologous end joining factor IFFO1 isoform X7 [Rattus norvegicus]
573 aa protein
accession:XP_063142428.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1112 | 1112 | 96% | 0.0 | 98.02% | XP_063142428.1 | |
| 2 | 487 | 487 | 84% | 4e-167 | 53.68% | XP_021329319.1 | |
| 3 | 439 | 439 | 83% | 2e-149 | 55.32% | NP_001411939.1 | |
| 4 | 739 | 739 | 63% | 0.0 | 100.00% | XP_063142425.1 | |
| 5 | 739 | 739 | 63% | 0.0 | 100.00% | XP_063142426.1 |