Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001104493.1 runt-related transcription factor 1 isoform 3 [Mus musculus] ... Query length: 451 aa

runt, isoform C ...

runt, isoform C [Drosophila melanogaster]

510 aa protein

accession:NP_001285501.1

Alignment Sequence Identical proteins

Runt-related transcription factor rnt-1 [Caenorhabditis elegans]

301 aa protein

accession:NP_001370335.1

Alignment Sequence Identical proteins

runt-related transcription factor 2 isoform X9 [Rattus norvegicus]

550 aa protein

accession:XP_063123568.1

Alignment Sequence Identical proteins

runt-related transcription factor 1 isoform X1 [Danio rerio]

514 aa protein

accession:XP_068076853.1

Alignment Sequence Identical proteins

runt-related transcription factor 1 isoform 3 [Mus musculus]

451 aa protein

accession:NP_001104493.1

Sequence Identical proteins

runt-related transcription factor 1 isoform X2 [Homo sapiens]

468 aa protein

accession:XP_005261125.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_005261125.1\|	runt-related transcription factor 1 isoform X2 [Homo sapiens]	867	867	98%	0.0	95.76%	XP_005261125.1
2 Select seq ref\|XP_068076853.1\|	runt-related transcription factor 1 isoform X1 [Danio rerio]	580	580	97%	0.0	71.71%	XP_068076853.1
3 Select seq ref\|XP_063123568.1\|	runt-related transcription factor 2 isoform X9 [Rattus norvegicus]	397	397	89%	3e-133	51.61%	XP_063123568.1
4 Select seq ref\|NP_001285501.1\|	runt, isoform C [Drosophila melanogaster]	202	202	31%	2e-58	64.58%	NP_001285501.1
5 Select seq ref\|NP_001370335.1\|	Runt-related transcription factor rnt-1 [Caenorhabditis elegans]	131	131	25%	6e-34	54.31%	NP_001370335.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments