Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001123110.2
Neurotransmitter-gated ion-channel ligand-binding domain-containing protein [Caenorhabditis elegans]
...
Query length:
389 aa
DOMAINS: and other(s) domains
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acetylcholine receptor subunit alpha isoform b precursor
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acetylcholine receptor subunit alpha isoform b precursor [Homo sapiens]
457 aa protein
accession:NP_000070.1
acetylcholine receptor subunit alpha precursor
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acetylcholine receptor subunit alpha precursor [Rattus norvegicus]
457 aa protein
accession:NP_077811.1
acetylcholine receptor subunit alpha precursor
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acetylcholine receptor subunit alpha precursor [Mus musculus]
457 aa protein
accession:NP_031415.2
neuronal acetylcholine receptor subunit alpha-10a precursor
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neuronal acetylcholine receptor subunit alpha-10a precursor [Danio rerio]
527 aa protein
accession:NP_001038269.1
Query: Neurotransmitter-gated ion-channel ligand-binding domain-containing protein
...
Neurotransmitter-gated ion-channel ligand-binding domain-containing protein [Caenorhabditis elegans]
389 aa protein
accession:NP_001123110.2
Neurotransmitter-gated ion-channel ligand-binding domain-containing protein
...
Neurotransmitter-gated ion-channel ligand-binding domain-containing protein [Caenorhabditis elegans]
397 aa protein
accession:NP_001022053.1
DOMAINS: and other(s) domains
...
acetylcholine receptor subunit alpha isoform b precursor [Homo sapiens]
457 aa protein
accession:NP_000070.1
acetylcholine receptor subunit alpha precursor [Rattus norvegicus]
457 aa protein
accession:NP_077811.1
acetylcholine receptor subunit alpha precursor [Mus musculus]
457 aa protein
accession:NP_031415.2
neuronal acetylcholine receptor subunit alpha-10a precursor [Danio rerio]
527 aa protein
accession:NP_001038269.1
Neurotransmitter-gated ion-channel ligand-binding domain-containing protein [Caenorhabditis elegans]
389 aa protein
accession:NP_001123110.2
Neurotransmitter-gated ion-channel ligand-binding domain-containing protein [Caenorhabditis elegans]
397 aa protein
accession:NP_001022053.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 221 | 221 | 97% | 4e-67 | 33.25% | NP_001022053.1 | |
| 2 | 61.6 | 61.6 | 38% | 6e-09 | 27.45% | NP_077811.1 | |
| 3 | 58.5 | 58.5 | 38% | 7e-08 | 26.80% | NP_000070.1 | |
| 4 | 57.4 | 57.4 | 38% | 2e-07 | 26.14% | NP_031415.2 | |
| 5 | 53.5 | 53.5 | 39% | 2e-06 | 25.95% | NP_001038269.1 |