Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001123964.1
vacuolar protein sorting-associated protein 28 homolog [Rattus norvegicus]
...
Query length:
221 aa
DOMAINS: and other(s) domains
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ESCRT-I subunit protein VPS28
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ESCRT-I subunit protein VPS28 [Saccharomyces cerevisiae S288C]
242 aa protein
accession:NP_015260.1
ESCRT I complex subunit Vps28
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ESCRT I complex subunit Vps28 [Schizosaccharomyces pombe]
248 aa protein
accession:NP_594791.1
vacuolar protein sorting-associated protein 28 homolog isoform X1
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vacuolar protein sorting-associated protein 28 homolog isoform X1 [Danio rerio]
223 aa protein
accession:XP_009292726.1
Query: vacuolar protein sorting-associated protein 28 homolog
...
vacuolar protein sorting-associated protein 28 homolog [Rattus norvegicus]
221 aa protein
accession:NP_001123964.1
vacuolar protein sorting-associated protein 28 homolog isoform 1
...
vacuolar protein sorting-associated protein 28 homolog isoform 1 [Homo sapiens]
221 aa protein
accession:NP_057292.1
vacuolar protein sorting-associated protein 28 homolog isoform X1
...
vacuolar protein sorting-associated protein 28 homolog isoform X1 [Homo sapiens]
204 aa protein
accession:XP_054188176.1
DOMAINS: and other(s) domains
...
ESCRT-I subunit protein VPS28 [Saccharomyces cerevisiae S288C]
242 aa protein
accession:NP_015260.1
ESCRT I complex subunit Vps28 [Schizosaccharomyces pombe]
248 aa protein
accession:NP_594791.1
vacuolar protein sorting-associated protein 28 homolog isoform X1 [Danio rerio]
223 aa protein
accession:XP_009292726.1
vacuolar protein sorting-associated protein 28 homolog [Rattus norvegicus]
221 aa protein
accession:NP_001123964.1
vacuolar protein sorting-associated protein 28 homolog isoform 1 [Homo sapiens]
221 aa protein
accession:NP_057292.1
vacuolar protein sorting-associated protein 28 homolog isoform X1 [Homo sapiens]
204 aa protein
accession:XP_054188176.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 459 | 459 | 100% | 3e-166 | 98.19% | NP_057292.1 | |
| 2 | 412 | 412 | 100% | 1e-147 | 88.79% | XP_009292726.1 | |
| 3 | 116 | 116 | 90% | 3e-31 | 30.09% | NP_015260.1 | |
| 4 | 102 | 102 | 83% | 2e-25 | 28.83% | NP_594791.1 | |
| 5 | 412 | 412 | 100% | 4e-148 | 90.50% | XP_054188176.1 |