Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001129429.1
short transient receptor potential channel 4 isoform delta [Homo sapiens]
...
Query length:
836 aa
DOMAINS: and other(s) domains
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Transient receptor ion channel domain-containing protein
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Transient receptor ion channel domain-containing protein [Caenorhabditis elegans]
1031 aa protein
accession:NP_001367402.1
short transient receptor potential channel 1 isoform 3
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short transient receptor potential channel 1 isoform 3 [Mus musculus]
786 aa protein
accession:NP_001400280.1
short transient receptor potential channel 5 isoform X1
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short transient receptor potential channel 5 isoform X1 [Rattus norvegicus]
974 aa protein
accession:XP_063135835.1
short transient receptor potential channel 5 isoform X2
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short transient receptor potential channel 5 isoform X2 [Homo sapiens]
746 aa protein
accession:XP_047298369.1
Query: short transient receptor potential channel 4 isoform delta
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short transient receptor potential channel 4 isoform delta [Homo sapiens]
836 aa protein
accession:NP_001129429.1
short transient receptor potential channel 4b isoform X1
...
short transient receptor potential channel 4b isoform X1 [Danio rerio]
915 aa protein
accession:XP_009290061.1
DOMAINS: and other(s) domains
...
Transient receptor ion channel domain-containing protein [Caenorhabditis elegans]
1031 aa protein
accession:NP_001367402.1
short transient receptor potential channel 1 isoform 3 [Mus musculus]
786 aa protein
accession:NP_001400280.1
short transient receptor potential channel 5 isoform X1 [Rattus norvegicus]
974 aa protein
accession:XP_063135835.1
short transient receptor potential channel 5 isoform X2 [Homo sapiens]
746 aa protein
accession:XP_047298369.1
short transient receptor potential channel 4 isoform delta [Homo sapiens]
836 aa protein
accession:NP_001129429.1
short transient receptor potential channel 4b isoform X1 [Danio rerio]
915 aa protein
accession:XP_009290061.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1323 | 1323 | 88% | 0.0 | 86.00% | XP_009290061.1 | |
| 2 | 1225 | 1225 | 88% | 0.0 | 78.03% | XP_063135835.1 | |
| 3 | 1216 | 1216 | 87% | 0.0 | 78.92% | XP_047298369.1 | |
| 4 | 646 | 646 | 86% | 0.0 | 47.23% | NP_001400280.1 | |
| 5 | 565 | 565 | 84% | 0.0 | 40.69% | NP_001367402.1 |