Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001135779.1
general transcription factor IIH subunit 1 [Homo sapiens]
...
Query length:
548 aa
DOMAINS: and other(s) domains
...
BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
...
BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) [Arabidopsis thaliana]
554 aa protein
accession:NP_001326379.1
BSD domain-containing protein
...
BSD domain-containing protein [Caenorhabditis elegans]
532 aa protein
accession:NP_499880.3
transcription factor B1, isoform D
...
transcription factor B1, isoform D [Drosophila melanogaster]
585 aa protein
accession:NP_001246321.1
general transcription factor IIH subunit 1
...
general transcription factor IIH subunit 1 [Danio rerio]
550 aa protein
accession:NP_001004596.1
Query: general transcription factor IIH subunit 1
...
general transcription factor IIH subunit 1 [Homo sapiens]
548 aa protein
accession:NP_001135779.1
general transcription factor IIH subunit 1 isoform 1
...
general transcription factor IIH subunit 1 isoform 1 [Mus musculus]
553 aa protein
accession:NP_001278004.1
DOMAINS: and other(s) domains
...
BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) [Arabidopsis thaliana]
554 aa protein
accession:NP_001326379.1
BSD domain-containing protein [Caenorhabditis elegans]
532 aa protein
accession:NP_499880.3
transcription factor B1, isoform D [Drosophila melanogaster]
585 aa protein
accession:NP_001246321.1
general transcription factor IIH subunit 1 [Danio rerio]
550 aa protein
accession:NP_001004596.1
general transcription factor IIH subunit 1 [Homo sapiens]
548 aa protein
accession:NP_001135779.1
general transcription factor IIH subunit 1 isoform 1 [Mus musculus]
553 aa protein
accession:NP_001278004.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1116 | 1116 | 100% | 0.0 | 97.08% | NP_001278004.1 | |
| 2 | 892 | 892 | 100% | 0.0 | 76.73% | NP_001004596.1 | |
| 3 | 511 | 511 | 99% | 2e-175 | 45.08% | NP_001246321.1 | |
| 4 | 209 | 209 | 98% | 2e-59 | 29.71% | NP_499880.3 | |
| 5 | 132 | 132 | 81% | 1e-31 | 26.28% | NP_001326379.1 |