Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001136416.1 tripartite motif-containing 43-like [Rattus norvegicus] ... Query length: 451 aa

E3 ubiquitin-protein ligase TRIM11 ...

E3 ubiquitin-protein ligase TRIM11 [Rattus norvegicus]

467 aa protein

accession:NP_001386475.1

Alignment Sequence Identical proteins

tripartite motif-containing protein 43 ...

tripartite motif-containing protein 43 [Homo sapiens]

446 aa protein

accession:NP_620155.1

Alignment Sequence Identical proteins

Query: tripartite motif-containing 43-like ...

tripartite motif-containing 43-like [Rattus norvegicus]

451 aa protein

accession:NP_001136416.1

Sequence Identical proteins

tripartite motif-containing protein 43C ...

tripartite motif-containing protein 43C [Mus musculus]

446 aa protein

accession:NP_001171329.1

Alignment Sequence Identical proteins

tripartite motif-containing protein 43B ...

tripartite motif-containing protein 43B [Mus musculus]

445 aa protein

accession:NP_001164355.1

Alignment Sequence Identical proteins

tripartite motif-containing protein 43A isoform 1 ...

tripartite motif-containing protein 43A isoform 1 [Mus musculus]

446 aa protein

accession:NP_001344616.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001171329.1\|	tripartite motif-containing protein 43C [Mus musculus]	476	476	99%	2e-165	54.42%	NP_001171329.1
2 Select seq ref\|NP_620155.1\|	tripartite motif-containing protein 43 [Homo sapiens]	385	385	98%	2e-129	47.20%	NP_620155.1
3 Select seq ref\|NP_001386475.1\|	E3 ubiquitin-protein ligase TRIM11 [Rattus norvegicus]	156	156	97%	3e-41	30.27%	NP_001386475.1
4 Select seq ref\|NP_001164355.1\|	tripartite motif-containing protein 43B [Mus musculus]	472	472	99%	9e-164	53.98%	NP_001164355.1
5 Select seq ref\|NP_001344616.1\|	tripartite motif-containing protein 43A isoform 1 [Mus musculus]	467	467	99%	8e-162	53.98%	NP_001344616.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments