Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001137161.1
histocompatibility 2, Q region locus 4 precursor [Mus musculus]
...
Query length:
354 aa
DOMAINS: and other(s) domains
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HLA class I histocompatibility antigen, A alpha chain isoform A*03:01:01:01 precursor
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HLA class I histocompatibility antigen, A alpha chain isoform A*03:01:01:01 precursor [Homo sapiens]
365 aa protein
accession:NP_002107.3
RT1 class I, locus CE12 isoform X4
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RT1 class I, locus CE12 isoform X4 [Rattus norvegicus]
344 aa protein
accession:XP_063135167.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 3 precursor
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H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 3 precursor [Mus musculus]
389 aa protein
accession:NP_001390291.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
Query: histocompatibility 2, Q region locus 4 precursor
...
histocompatibility 2, Q region locus 4 precursor [Mus musculus]
354 aa protein
accession:NP_001137161.1
H-2 class I histocompatibility antigen, Q8 alpha chain isoform a precursor
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H-2 class I histocompatibility antigen, Q8 alpha chain isoform a precursor [Mus musculus]
326 aa protein
accession:NP_001411248.1
DOMAINS: and other(s) domains
...
HLA class I histocompatibility antigen, A alpha chain isoform A*03:01:01:01 precursor [Homo sapiens]
365 aa protein
accession:NP_002107.3
RT1 class I, locus CE12 isoform X4 [Rattus norvegicus]
344 aa protein
accession:XP_063135167.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 3 precursor [Mus musculus]
389 aa protein
accession:NP_001390291.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
histocompatibility 2, Q region locus 4 precursor [Mus musculus]
354 aa protein
accession:NP_001137161.1
H-2 class I histocompatibility antigen, Q8 alpha chain isoform a precursor [Mus musculus]
326 aa protein
accession:NP_001411248.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 538 | 538 | 86% | 0.0 | 84.64% | NP_001390291.1 | |
| 2 | 501 | 501 | 85% | 1e-178 | 78.41% | XP_063135167.1 | |
| 3 | 436 | 436 | 83% | 1e-152 | 69.59% | NP_002107.3 | |
| 4 | 531 | 531 | 86% | 0.0 | 83.93% | NP_001411248.1 | |
| 5 | 523 | 523 | 83% | 0.0 | 84.75% | NP_001390292.1 |