Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001146918.1 short coiled-coil protein isoform 4 [Homo sapiens] ... Query length: 122 aa

short coiled-coil protein-like ...

short coiled-coil protein-like [Mus musculus]

162 aa protein

accession:XP_036019406.1

Alignment Sequence Identical proteins

short coiled-coil protein isoform X1 ...

short coiled-coil protein isoform X1 [Homo sapiens]

82 aa protein

accession:XP_047272023.1

Alignment Sequence Identical proteins

short coiled-coil protein isoform X1 ...

short coiled-coil protein isoform X1 [Rattus norvegicus]

124 aa protein

accession:XP_006255354.3

Alignment Sequence Identical proteins

short coiled-coil protein isoform X3 ...

short coiled-coil protein isoform X3 [Rattus norvegicus]

81 aa protein

accession:XP_063134245.1

Alignment Sequence Identical proteins

Query: short coiled-coil protein isoform 4 ...

short coiled-coil protein isoform 4 [Homo sapiens]

122 aa protein

accession:NP_001146918.1

Sequence Identical proteins

short coiled-coil protein B ...

short coiled-coil protein B [Danio rerio]

80 aa protein

accession:NP_001005966.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_006255354.3\|	short coiled-coil protein isoform X1 [Rattus norvegicus]	199	199	100%	1e-66	84.43%	XP_006255354.3
2 Select seq ref\|XP_036019406.1\|	short coiled-coil protein-like [Mus musculus]	172	172	81%	3e-55	87.88%	XP_036019406.1
3 Select seq ref\|XP_047272023.1\|	short coiled-coil protein isoform X1 [Homo sapiens]	163	163	67%	4e-53	100.00%	XP_047272023.1
4 Select seq ref\|NP_001005966.2\|	short coiled-coil protein B [Danio rerio]	145	145	66%	6e-46	92.59%	NP_001005966.2
5 Select seq ref\|XP_063134245.1\|	short coiled-coil protein isoform X3 [Rattus norvegicus]	157	157	67%	2e-50	98.78%	XP_063134245.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments