Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001147024.2 short coiled-coil protein isoform 3 [Homo sapiens] ... Query length: 54 aa

uncharacterized protein Dmel_CG5934 ...

uncharacterized protein Dmel_CG5934 [Drosophila melanogaster]

135 aa protein

accession:NP_651552.1

Alignment Sequence Identical proteins

short coiled-coil protein A isoform X1 ...

short coiled-coil protein A isoform X1 [Danio rerio]

80 aa protein

accession:XP_005160061.1

Alignment Sequence Identical proteins

Query: short coiled-coil protein isoform 3 ...

short coiled-coil protein isoform 3 [Homo sapiens]

54 aa protein

accession:NP_001147024.2

Sequence Identical proteins

short coiled-coil protein isoform 1 ...

short coiled-coil protein isoform 1 [Rattus norvegicus]

122 aa protein

accession:NP_001013253.1

Alignment Sequence Identical proteins

short coiled-coil protein isoform c ...

short coiled-coil protein isoform c [Mus musculus]

81 aa protein

accession:NP_001272921.1

Alignment Sequence Identical proteins

short coiled-coil protein isoform 6 ...

short coiled-coil protein isoform 6 [Homo sapiens]

94 aa protein

accession:NP_001147162.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001147162.1\|	short coiled-coil protein isoform 6 [Homo sapiens]	109	109	100%	3e-32	100.00%	NP_001147162.1
2 Select seq ref\|XP_005160061.1\|	short coiled-coil protein A isoform X1 [Danio rerio]	96.3	96.3	90%	3e-27	95.92%	XP_005160061.1
3 Select seq ref\|NP_001272921.1\|	short coiled-coil protein isoform c [Mus musculus]	96.3	96.3	90%	3e-27	95.92%	NP_001272921.1
4 Select seq ref\|NP_001013253.1\|	short coiled-coil protein isoform 1 [Rattus norvegicus]	96.3	96.3	90%	1e-26	95.92%	NP_001013253.1
5 Select seq ref\|NP_651552.1\|	uncharacterized protein Dmel_CG5934 [Drosophila melanogaster]	81.6	81.6	90%	1e-20	77.55%	NP_651552.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments