Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001156942.1
TRAF-type zinc finger domain-containing protein 1 isoform 1 [Mus musculus]
...
Query length:
580 aa
DOMAINS: and other(s) domains
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TNF receptor-associated factor 3 isoform a
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TNF receptor-associated factor 3 isoform a [Mus musculus]
567 aa protein
accession:NP_001409354.1
TNF receptor-associated factor 3 isoform X3
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TNF receptor-associated factor 3 isoform X3 [Rattus norvegicus]
567 aa protein
accession:XP_063118217.1
uncharacterized protein LOC100779441
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uncharacterized protein LOC100779441 [Glycine max]
573 aa protein
accession:XP_003545558.2
ubiquitin fusion degradation protein 1, putative
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ubiquitin fusion degradation protein 1, putative [Plasmodium falciparum 3D7]
700 aa protein
accession:XP_001351804.1
Query: TRAF-type zinc finger domain-containing protein 1 isoform 1
...
TRAF-type zinc finger domain-containing protein 1 isoform 1 [Mus musculus]
580 aa protein
accession:NP_001156942.1
TRAF-type zinc finger domain-containing protein 1
...
TRAF-type zinc finger domain-containing protein 1 [Danio rerio]
565 aa protein
accession:NP_001082984.1
DOMAINS: and other(s) domains
...
TNF receptor-associated factor 3 isoform a [Mus musculus]
567 aa protein
accession:NP_001409354.1
TNF receptor-associated factor 3 isoform X3 [Rattus norvegicus]
567 aa protein
accession:XP_063118217.1
uncharacterized protein LOC100779441 [Glycine max]
573 aa protein
accession:XP_003545558.2
ubiquitin fusion degradation protein 1, putative [Plasmodium falciparum 3D7]
700 aa protein
accession:XP_001351804.1
TRAF-type zinc finger domain-containing protein 1 isoform 1 [Mus musculus]
580 aa protein
accession:NP_001156942.1
TRAF-type zinc finger domain-containing protein 1 [Danio rerio]
565 aa protein
accession:NP_001082984.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 245 | 245 | 72% | 9e-73 | 36.63% | NP_001082984.1 | |
| 2 | 83.2 | 83.2 | 20% | 8e-16 | 32.00% | XP_003545558.2 | |
| 3 | 66.2 | 66.2 | 14% | 2e-10 | 29.70% | XP_001351804.1 | |
| 4 | 44.7 | 44.7 | 16% | 9e-04 | 31.68% | NP_001409354.1 | |
| 5 | 44.3 | 44.3 | 16% | 0.001 | 32.67% | XP_063118217.1 |