Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001157118.1 5-hydroxytryptamine receptor 3D isoform 3 precursor [Homo sapiens] ... Query length: 454 aa

5-hydroxytryptamine receptor 3A-like isoform X2 ...

5-hydroxytryptamine receptor 3A-like isoform X2 [Danio rerio]

467 aa protein

accession:XP_009294780.1

Alignment Sequence Identical proteins

5-hydroxytryptamine receptor 3A isoform 1 precursor ...

5-hydroxytryptamine receptor 3A isoform 1 precursor [Mus musculus]

489 aa protein

accession:NP_038589.2

Alignment Sequence Identical proteins

5-hydroxytryptamine receptor 3E isoform a ...

5-hydroxytryptamine receptor 3E isoform a [Homo sapiens]

471 aa protein

accession:NP_872395.2

Alignment Sequence Identical proteins

5-hydroxytryptamine receptor 3E isoform b ...

5-hydroxytryptamine receptor 3E isoform b [Homo sapiens]

456 aa protein

accession:NP_938056.1

Alignment Sequence Identical proteins

Query: 5-hydroxytryptamine receptor 3D isoform 3 precursor ...

5-hydroxytryptamine receptor 3D isoform 3 precursor [Homo sapiens]

454 aa protein

accession:NP_001157118.1

Sequence Identical proteins

5-hydroxytryptamine receptor 3D isoform 1 ...

5-hydroxytryptamine receptor 3D isoform 1 [Homo sapiens]

404 aa protein

accession:NP_001138615.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001138615.1\|	5-hydroxytryptamine receptor 3D isoform 1 [Homo sapiens]	691	691	78%	0.0	93.22%	NP_001138615.1
2 Select seq ref\|XP_009294780.1\|	5-hydroxytryptamine receptor 3A-like isoform X2 [Danio rerio]	172	172	92%	3e-47	28.54%	XP_009294780.1
3 Select seq ref\|NP_038589.2\|	5-hydroxytryptamine receptor 3A isoform 1 precursor [Mus musculus]	162	162	88%	2e-43	29.32%	NP_038589.2
4 Select seq ref\|NP_872395.2\|	5-hydroxytryptamine receptor 3E isoform a [Homo sapiens]	520	520	98%	0.0	60.00%	NP_872395.2
5 Select seq ref\|NP_938056.1\|	5-hydroxytryptamine receptor 3E isoform b [Homo sapiens]	515	515	98%	1e-180	60.04%	NP_938056.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments