Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001157206.1
ribosomal RNA processing protein 1 homolog B isoform 2 [Mus musculus]
...
Query length:
623 aa
DOMAINS: and other(s) domains
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ribosomal RNA processing protein 1 homolog isoform X1
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ribosomal RNA processing protein 1 homolog isoform X1 [Glycine max]
541 aa protein
accession:XP_040863925.1
ribosomal RNA processing-like protein
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ribosomal RNA processing-like protein [Arabidopsis thaliana]
532 aa protein
accession:NP_197560.2
ribosomal RNA processing protein 1 homolog A
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ribosomal RNA processing protein 1 homolog A [Danio rerio]
389 aa protein
accession:XP_021334757.1
ribosomal RNA processing protein 1 homolog B
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ribosomal RNA processing protein 1 homolog B [Homo sapiens]
758 aa protein
accession:NP_055871.1
Query: ribosomal RNA processing protein 1 homolog B isoform 2
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ribosomal RNA processing protein 1 homolog B isoform 2 [Mus musculus]
623 aa protein
accession:NP_001157206.1
ribosomal RNA processing protein 1 homolog B isoform 1
...
ribosomal RNA processing protein 1 homolog B isoform 1 [Mus musculus]
724 aa protein
accession:NP_082520.2
DOMAINS: and other(s) domains
...
ribosomal RNA processing protein 1 homolog isoform X1 [Glycine max]
541 aa protein
accession:XP_040863925.1
ribosomal RNA processing-like protein [Arabidopsis thaliana]
532 aa protein
accession:NP_197560.2
ribosomal RNA processing protein 1 homolog A [Danio rerio]
389 aa protein
accession:XP_021334757.1
ribosomal RNA processing protein 1 homolog B [Homo sapiens]
758 aa protein
accession:NP_055871.1
ribosomal RNA processing protein 1 homolog B isoform 2 [Mus musculus]
623 aa protein
accession:NP_001157206.1
ribosomal RNA processing protein 1 homolog B isoform 1 [Mus musculus]
724 aa protein
accession:NP_082520.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1277 | 1277 | 100% | 0.0 | 100.00% | NP_082520.2 | |
| 2 | 672 | 672 | 100% | 0.0 | 58.52% | NP_055871.1 | |
| 3 | 170 | 170 | 36% | 6e-46 | 39.48% | XP_021334757.1 | |
| 4 | 77.8 | 77.8 | 19% | 1e-13 | 34.15% | XP_040863925.1 | |
| 5 | 66.2 | 66.2 | 19% | 5e-10 | 31.15% | NP_197560.2 |