Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001158004.1
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform 3 [Mus musculus]
...
Query length:
280 aa
DOMAINS: and other(s) domains
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zinc finger CCCH domain-containing protein 3
...
zinc finger CCCH domain-containing protein 3 [Homo sapiens]
948 aa protein
accession:NP_055932.2
cleavage polyadenylation factor RNA-binding subunit YTH1
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cleavage polyadenylation factor RNA-binding subunit YTH1 [Saccharomyces cerevisiae S288C]
208 aa protein
accession:NP_015432.1
cleavage and polyadenylation specificity factor subunit 4 isoform X1
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cleavage and polyadenylation specificity factor subunit 4 isoform X1 [Danio rerio]
270 aa protein
accession:XP_021324974.1
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X2
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putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X2 [Rattus norvegicus]
226 aa protein
accession:XP_063126239.1
Query: putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform 3
...
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform 3 [Mus musculus]
280 aa protein
accession:NP_001158004.1
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X14
...
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X14 [Mus musculus]
176 aa protein
accession:XP_036012725.1
DOMAINS: and other(s) domains
...
zinc finger CCCH domain-containing protein 3 [Homo sapiens]
948 aa protein
accession:NP_055932.2
cleavage polyadenylation factor RNA-binding subunit YTH1 [Saccharomyces cerevisiae S288C]
208 aa protein
accession:NP_015432.1
cleavage and polyadenylation specificity factor subunit 4 isoform X1 [Danio rerio]
270 aa protein
accession:XP_021324974.1
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X2 [Rattus norvegicus]
226 aa protein
accession:XP_063126239.1
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform 3 [Mus musculus]
280 aa protein
accession:NP_001158004.1
putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X14 [Mus musculus]
176 aa protein
accession:XP_036012725.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 367 | 367 | 100% | 4e-129 | 68.68% | XP_063126239.1 | |
| 2 | 360 | 360 | 62% | 6e-127 | 99.43% | XP_036012725.1 | |
| 3 | 199 | 199 | 90% | 3e-62 | 39.25% | XP_021324974.1 | |
| 4 | 116 | 116 | 50% | 1e-30 | 40.00% | NP_015432.1 | |
| 5 | 90.5 | 90.5 | 57% | 2e-19 | 34.97% | NP_055932.2 |