Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001162586.1 trafficking protein particle complex subunit 11 [Rattus norvegicus] ... Query length: 1133 aa

gryzun ...

gryzun [Drosophila melanogaster]

1320 aa protein

accession:NP_647785.3

Alignment Sequence Identical proteins

trafficking protein particle complex subunit 11 ...

trafficking protein particle complex subunit 11 [Danio rerio]

1132 aa protein

accession:NP_955920.2

Alignment Sequence Identical proteins

trafficking protein particle complex subunit 11 isoform a ...

trafficking protein particle complex subunit 11 isoform a [Homo sapiens]

1133 aa protein

accession:NP_068761.4

Alignment Sequence Identical proteins

trafficking protein particle complex subunit 11 ...

trafficking protein particle complex subunit 11 [Mus musculus]

1133 aa protein

accession:NP_796214.2

Alignment Sequence Identical proteins

Query: trafficking protein particle complex subunit 11 ...

trafficking protein particle complex subunit 11 [Rattus norvegicus]

1133 aa protein

accession:NP_001162586.1

Sequence Identical proteins

trafficking protein particle complex subunit 11 isoform X1 ...

trafficking protein particle complex subunit 11 isoform X1 [Rattus norvegicus]

1193 aa protein

accession:XP_006253196.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_006253196.1\|	trafficking protein particle complex subunit 11 isoform X1 [Rattus norvegicus]	2344	2344	99%	0.0	99.82%	XP_006253196.1
2 Select seq ref\|NP_796214.2\|	trafficking protein particle complex subunit 11 [Mus musculus]	2308	2308	100%	0.0	96.56%	NP_796214.2
3 Select seq ref\|NP_068761.4\|	trafficking protein particle complex subunit 11 isoform a [Homo sapiens]	2241	2241	100%	0.0	94.44%	NP_068761.4
4 Select seq ref\|NP_955920.2\|	trafficking protein particle complex subunit 11 [Danio rerio]	1880	1880	100%	0.0	78.11%	NP_955920.2
5 Select seq ref\|NP_647785.3\|	gryzun [Drosophila melanogaster]	478	534	73%	1e-146	37.31%	NP_647785.3

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments