Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001162788.1 shaker, isoform H [Drosophila melanogaster] ... Query length: 304 aa

BTB domain-containing protein ...

BTB domain-containing protein [Caenorhabditis elegans]

479 aa protein

accession:NP_001366842.1

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily A member 6 isoform X1 ...

potassium voltage-gated channel subfamily A member 6 isoform X1 [Rattus norvegicus]

530 aa protein

accession:XP_063142734.1

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily A member 6 ...

potassium voltage-gated channel subfamily A member 6 [Mus musculus]

529 aa protein

accession:NP_001397001.1

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily A member 3 ...

potassium voltage-gated channel subfamily A member 3 [Danio rerio]

515 aa protein

accession:XP_021332959.1

Alignment Sequence Identical proteins

Query: shaker, isoform H ...

shaker, isoform H [Drosophila melanogaster]

304 aa protein

accession:NP_001162788.1

Sequence Identical proteins

shaker, isoform T ...

shaker, isoform T [Drosophila melanogaster]

655 aa protein

accession:NP_001303569.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001303569.1\|	shaker, isoform T [Drosophila melanogaster]	604	604	94%	0.0	100.00%	NP_001303569.1
2 Select seq ref\|XP_021332959.1\|	potassium voltage-gated channel subfamily A member 3 [Danio rerio]	376	376	82%	1e-127	71.71%	XP_021332959.1
3 Select seq ref\|XP_063142734.1\|	potassium voltage-gated channel subfamily A member 6 isoform X1 [Rattus norvegicus]	324	324	78%	3e-107	58.01%	XP_063142734.1
4 Select seq ref\|NP_001397001.1\|	potassium voltage-gated channel subfamily A member 6 [Mus musculus]	323	323	78%	5e-107	58.21%	NP_001397001.1
5 Select seq ref\|NP_001366842.1\|	BTB domain-containing protein [Caenorhabditis elegans]	134	134	75%	6e-35	31.65%	NP_001366842.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments