Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001162967.1 ubiquitination factor E4B, isoform B [Drosophila melanogaster] ... Query length: 1217 aa

Ubiquitin conjugation factor E4 ufd-2 ...

Ubiquitin conjugation factor E4 ufd-2 [Caenorhabditis elegans]

979 aa protein

accession:NP_001022320.1

Alignment Sequence Identical proteins

Query: ubiquitination factor E4B, isoform B ...

ubiquitination factor E4B, isoform B [Drosophila melanogaster]

1217 aa protein

accession:NP_001162967.1

Sequence Identical proteins

ubiquitin conjugation factor E4 B ...

ubiquitin conjugation factor E4 B [Rattus norvegicus]

1173 aa protein

accession:NP_001258127.1

Alignment Sequence Identical proteins

ubiquitin conjugation factor E4 B isoform 1 ...

ubiquitin conjugation factor E4 B isoform 1 [Mus musculus]

1173 aa protein

accession:NP_071305.2

Alignment Sequence Identical proteins

ubiquitin conjugation factor E4 B isoform 2 ...

ubiquitin conjugation factor E4 B isoform 2 [Homo sapiens]

1173 aa protein

accession:NP_006039.2

Alignment Sequence Identical proteins

ubiquitin conjugation factor E4 B ...

ubiquitin conjugation factor E4 B [Danio rerio]

1183 aa protein

accession:NP_919343.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001258127.1\|	ubiquitin conjugation factor E4 B [Rattus norvegicus]	702	702	83%	0.0	38.96%	NP_001258127.1
2 Select seq ref\|NP_071305.2\|	ubiquitin conjugation factor E4 B isoform 1 [Mus musculus]	701	701	83%	0.0	38.87%	NP_071305.2
3 Select seq ref\|NP_919343.2\|	ubiquitin conjugation factor E4 B [Danio rerio]	701	701	83%	0.0	39.08%	NP_919343.2
4 Select seq ref\|NP_006039.2\|	ubiquitin conjugation factor E4 B isoform 2 [Homo sapiens]	693	693	83%	0.0	38.52%	NP_006039.2
5 Select seq ref\|NP_001022320.1\|	Ubiquitin conjugation factor E4 ufd-2 [Caenorhabditis elegans]	373	373	65%	2e-110	30.53%	NP_001022320.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments