Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001178028.1 steroidogenic factor 1 isoform 1 [Rattus norvegicus] ... Query length: 462 aa

nuclear receptor subfamily 6 group A member 1 isoform 5 ...

nuclear receptor subfamily 6 group A member 1 isoform 5 [Homo sapiens]

479 aa protein

accession:NP_001397925.1

Alignment Sequence Identical proteins

retinoic acid receptor RXR-gamma isoform 3 ...

retinoic acid receptor RXR-gamma isoform 3 [Mus musculus]

437 aa protein

accession:NP_001407424.1

Alignment Sequence Identical proteins

ftz transcription factor 1, isoform D ...

ftz transcription factor 1, isoform D [Drosophila melanogaster]

853 aa protein

accession:NP_001303366.1

Alignment Sequence Identical proteins

nuclear receptor subfamily 5 group A member 2 isoform X1 ...

nuclear receptor subfamily 5 group A member 2 isoform X1 [Danio rerio]

507 aa protein

accession:XP_009294501.1

Alignment Sequence Identical proteins

Query: steroidogenic factor 1 isoform 1 ...

steroidogenic factor 1 isoform 1 [Rattus norvegicus]

462 aa protein

accession:NP_001178028.1

Sequence Identical proteins

steroidogenic factor 1 isoform X1 ...

steroidogenic factor 1 isoform X1 [Rattus norvegicus]

498 aa protein

accession:XP_063140756.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_063140756.1\|	steroidogenic factor 1 isoform X1 [Rattus norvegicus]	932	932	100%	0.0	92.77%	XP_063140756.1
2 Select seq ref\|XP_009294501.1\|	nuclear receptor subfamily 5 group A member 2 isoform X1 [Danio rerio]	554	554	100%	0.0	58.49%	XP_009294501.1
3 Select seq ref\|NP_001303366.1\|	ftz transcription factor 1, isoform D [Drosophila melanogaster]	204	356	75%	8e-57	61.25%	NP_001303366.1
4 Select seq ref\|NP_001397925.1\|	nuclear receptor subfamily 6 group A member 1 isoform 5 [Homo sapiens]	157	157	90%	1e-41	27.70%	NP_001397925.1
5 Select seq ref\|NP_001407424.1\|	retinoic acid receptor RXR-gamma isoform 3 [Mus musculus]	118	229	60%	4e-28	34.17%	NP_001407424.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments