Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001180588.1 claudin-12 [Mus musculus] ... Query length: 244 aa

claudin-19 isoform c ...

claudin-19 isoform c [Homo sapiens]

218 aa protein

accession:NP_001172046.1

Alignment Sequence Identical proteins

claudin-4 ...

claudin-4 [Danio rerio]

228 aa protein

accession:XP_068071440.1

Alignment Sequence Identical proteins

claudin 3c ...

claudin 3c [Danio rerio]

214 aa protein

accession:NP_571842.1

Alignment Sequence Identical proteins

claudin-12 ...

claudin-12 [Danio rerio]

341 aa protein

accession:NP_571848.1

Alignment Sequence Identical proteins

Query: claudin-12 ...

claudin-12 [Mus musculus]

244 aa protein

accession:NP_001180588.1

Sequence Identical proteins

claudin-12 ...

claudin-12 [Homo sapiens]

244 aa protein

accession:NP_001172001.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001172001.1\|	claudin-12 [Homo sapiens]	468	468	100%	1e-168	91.39%	NP_001172001.1
2 Select seq ref\|NP_571848.1\|	claudin-12 [Danio rerio]	247	283	98%	4e-80	51.29%	NP_571848.1
3 Select seq ref\|NP_001172046.1\|	claudin-19 isoform c [Homo sapiens]	45.8	45.8	59%	1e-04	28.08%	NP_001172046.1
4 Select seq ref\|XP_068071440.1\|	claudin-4 [Danio rerio]	45.8	45.8	72%	1e-04	25.67%	XP_068071440.1
5 Select seq ref\|NP_571842.1\|	claudin 3c [Danio rerio]	43.5	43.5	81%	7e-04	22.49%	NP_571842.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments