Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001185988.1
rab5 GDP/GTP exchange factor isoform a [Mus musculus]
...
Query length:
491 aa
DOMAINS: and other(s) domains
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LOW QUALITY PROTEIN: putative guanyl-nucleotide exchange factor Vps901
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LOW QUALITY PROTEIN: putative guanyl-nucleotide exchange factor Vps901 [Schizosaccharomyces pombe]
572 aa protein
accession:NP_596110.3
vacuolar protein sorting-associated protein 9A
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vacuolar protein sorting-associated protein 9A [Glycine max]
377 aa protein
accession:XP_003523864.3
Rab5 GDP/GTP exchange factor
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Rab5 GDP/GTP exchange factor [Caenorhabditis elegans]
517 aa protein
accession:NP_001379324.1
rab5 GDP/GTP exchange factor isoform X4
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rab5 GDP/GTP exchange factor isoform X4 [Rattus norvegicus]
515 aa protein
accession:XP_063127565.1
Query: rab5 GDP/GTP exchange factor isoform a
...
rab5 GDP/GTP exchange factor isoform a [Mus musculus]
491 aa protein
accession:NP_001185988.1
rab5 GDP/GTP exchange factor isoform c
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rab5 GDP/GTP exchange factor isoform c [Mus musculus]
492 aa protein
accession:NP_001390211.1
DOMAINS: and other(s) domains
...
LOW QUALITY PROTEIN: putative guanyl-nucleotide exchange factor Vps901 [Schizosaccharomyces pombe]
572 aa protein
accession:NP_596110.3
vacuolar protein sorting-associated protein 9A [Glycine max]
377 aa protein
accession:XP_003523864.3
Rab5 GDP/GTP exchange factor [Caenorhabditis elegans]
517 aa protein
accession:NP_001379324.1
rab5 GDP/GTP exchange factor isoform X4 [Rattus norvegicus]
515 aa protein
accession:XP_063127565.1
rab5 GDP/GTP exchange factor isoform a [Mus musculus]
491 aa protein
accession:NP_001185988.1
rab5 GDP/GTP exchange factor isoform c [Mus musculus]
492 aa protein
accession:NP_001390211.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1018 | 1018 | 100% | 0.0 | 99.80% | NP_001390211.1 | |
| 2 | 1015 | 1015 | 100% | 0.0 | 99.19% | XP_063127565.1 | |
| 3 | 238 | 238 | 77% | 1e-71 | 34.87% | NP_001379324.1 | |
| 4 | 118 | 118 | 49% | 2e-27 | 30.62% | NP_596110.3 | |
| 5 | 108 | 108 | 65% | 6e-25 | 27.49% | XP_003523864.3 |