Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001188796.1 loquacious, isoform D [Drosophila melanogaster] ... Query length: 359 aa

RISC-loading complex subunit tarbp2 ...

RISC-loading complex subunit tarbp2 [Danio rerio]

346 aa protein

accession:NP_956291.1

Alignment Sequence Identical proteins

RISC-loading complex subunit TARBP2 isoform 12 ...

RISC-loading complex subunit TARBP2 isoform 12 [Mus musculus]

277 aa protein

accession:NP_001403266.1

Alignment Sequence Identical proteins

RISC-loading complex subunit TARBP2 isoform X1 ...

RISC-loading complex subunit TARBP2 isoform X1 [Rattus norvegicus]

325 aa protein

accession:XP_006242491.1

Alignment Sequence Identical proteins

interferon-inducible double-stranded RNA-dependent protein kinase activator A isoform 3 ...

interferon-inducible double-stranded RNA-dependent protein kinase activator A isoform 3 [Homo sapiens]

288 aa protein

accession:NP_001132990.1

Alignment Sequence Identical proteins

Query: loquacious, isoform D ...

loquacious, isoform D [Drosophila melanogaster]

359 aa protein

accession:NP_001188796.1

Sequence Identical proteins

loquacious, isoform B ...

loquacious, isoform B [Drosophila melanogaster]

465 aa protein

accession:NP_609646.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_609646.1\|	loquacious, isoform B [Drosophila melanogaster]	695	695	93%	0.0	100.00%	NP_609646.1
2 Select seq ref\|NP_956291.1\|	RISC-loading complex subunit tarbp2 [Danio rerio]	99.4	99.4	52%	5e-22	36.84%	NP_956291.1
3 Select seq ref\|NP_001403266.1\|	RISC-loading complex subunit TARBP2 isoform 12 [Mus musculus]	97.1	97.1	52%	1e-21	32.63%	NP_001403266.1
4 Select seq ref\|XP_006242491.1\|	RISC-loading complex subunit TARBP2 isoform X1 [Rattus norvegicus]	97.1	97.1	52%	3e-21	32.63%	XP_006242491.1
5 Select seq ref\|NP_001132990.1\|	interferon-inducible double-stranded RNA-dependent protein kinase activator A isoform 3 [Homo sapiens]	87.0	87.0	50%	5e-18	34.21%	NP_001132990.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments