Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001189433.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform 3 [Homo sapiens]
...
Query length:
842 aa
DOMAINS: and other(s) domains
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TFIIF-interacting CTD phosphatase, isoform B
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TFIIF-interacting CTD phosphatase, isoform B [Drosophila melanogaster]
880 aa protein
accession:NP_001286846.1
RNA polymerase II subunit A C-terminal domain phosphatase
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RNA polymerase II subunit A C-terminal domain phosphatase [Caenorhabditis elegans]
659 aa protein
accession:NP_492423.2
RNA polymerase II subunit A C-terminal domain phosphatase
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RNA polymerase II subunit A C-terminal domain phosphatase [Danio rerio]
947 aa protein
accession:NP_001002873.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X2
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RNA polymerase II subunit A C-terminal domain phosphatase isoform X2 [Mus musculus]
841 aa protein
accession:XP_011245398.1
Query: RNA polymerase II subunit A C-terminal domain phosphatase isoform 3
...
RNA polymerase II subunit A C-terminal domain phosphatase isoform 3 [Homo sapiens]
842 aa protein
accession:NP_001189433.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform 1
...
RNA polymerase II subunit A C-terminal domain phosphatase isoform 1 [Homo sapiens]
961 aa protein
accession:NP_004706.3
DOMAINS: and other(s) domains
...
TFIIF-interacting CTD phosphatase, isoform B [Drosophila melanogaster]
880 aa protein
accession:NP_001286846.1
RNA polymerase II subunit A C-terminal domain phosphatase [Caenorhabditis elegans]
659 aa protein
accession:NP_492423.2
RNA polymerase II subunit A C-terminal domain phosphatase [Danio rerio]
947 aa protein
accession:NP_001002873.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X2 [Mus musculus]
841 aa protein
accession:XP_011245398.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform 3 [Homo sapiens]
842 aa protein
accession:NP_001189433.1
RNA polymerase II subunit A C-terminal domain phosphatase isoform 1 [Homo sapiens]
961 aa protein
accession:NP_004706.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1721 | 1721 | 100% | 0.0 | 100.00% | NP_004706.3 | |
2 | 1210 | 1210 | 100% | 0.0 | 77.09% | XP_011245398.1 | |
3 | 891 | 891 | 100% | 0.0 | 58.06% | NP_001002873.1 | |
4 | 263 | 394 | 42% | 5e-74 | 59.26% | NP_001286846.1 | |
5 | 218 | 319 | 46% | 2e-59 | 48.18% | NP_492423.2 |