Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001190961.1
Homeodomain-like superfamily protein [Arabidopsis thaliana]
...
Query length:
624 aa
DOMAINS: and other(s) domains
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transcription factor TFIIIB component B'' homolog isoform 1
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transcription factor TFIIIB component B'' homolog isoform 1 [Rattus norvegicus]
2485 aa protein
accession:NP_001389090.1
transcription factor TFIIIB component B'' homolog isoform X5
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transcription factor TFIIIB component B'' homolog isoform X5 [Mus musculus]
2212 aa protein
accession:XP_036013988.1
transcription factor TFIIIB complex subunit Bdp1
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transcription factor TFIIIB complex subunit Bdp1 [Schizosaccharomyces pombe]
520 aa protein
accession:NP_588496.2
uncharacterized protein LOC100792788 isoform X1
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uncharacterized protein LOC100792788 isoform X1 [Glycine max]
935 aa protein
accession:XP_003516729.1
Query: Homeodomain-like superfamily protein
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Homeodomain-like superfamily protein [Arabidopsis thaliana]
624 aa protein
accession:NP_001190961.1
Homeodomain-like superfamily protein
...
Homeodomain-like superfamily protein [Arabidopsis thaliana]
601 aa protein
accession:NP_001320166.1
DOMAINS: and other(s) domains
...
transcription factor TFIIIB component B'' homolog isoform 1 [Rattus norvegicus]
2485 aa protein
accession:NP_001389090.1
transcription factor TFIIIB component B'' homolog isoform X5 [Mus musculus]
2212 aa protein
accession:XP_036013988.1
transcription factor TFIIIB complex subunit Bdp1 [Schizosaccharomyces pombe]
520 aa protein
accession:NP_588496.2
uncharacterized protein LOC100792788 isoform X1 [Glycine max]
935 aa protein
accession:XP_003516729.1
Homeodomain-like superfamily protein [Arabidopsis thaliana]
624 aa protein
accession:NP_001190961.1
Homeodomain-like superfamily protein [Arabidopsis thaliana]
601 aa protein
accession:NP_001320166.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1235 | 1235 | 96% | 0.0 | 99.83% | NP_001320166.1 | |
| 2 | 155 | 155 | 48% | 5e-38 | 34.95% | XP_003516729.1 | |
| 3 | 72.0 | 72.0 | 13% | 9e-12 | 41.67% | NP_588496.2 | |
| 4 | 60.1 | 60.1 | 14% | 8e-08 | 32.97% | NP_001389090.1 | |
| 5 | 60.1 | 60.1 | 14% | 9e-08 | 32.97% | XP_036013988.1 |