Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001230085.2
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3 [Homo sapiens]
...
Query length:
843 aa
DOMAINS: and other(s) domains
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uncharacterized protein LOC100797045
...
uncharacterized protein LOC100797045 [Glycine max]
894 aa protein
accession:XP_006588648.1
TATA box-binding protein-associated factor RNA polymerase I subunit C
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TATA box-binding protein-associated factor RNA polymerase I subunit C [Danio rerio]
994 aa protein
accession:XP_002665919.3
TATA box-binding protein-associated factor, RNA polymerase I, subunit C
...
TATA box-binding protein-associated factor, RNA polymerase I, subunit C [Rattus norvegicus]
842 aa protein
accession:NP_001014177.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 1
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 1 [Mus musculus]
836 aa protein
accession:NP_067416.2
Query: TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3 [Homo sapiens]
843 aa protein
accession:NP_001230085.2
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X3
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X3 [Homo sapiens]
844 aa protein
accession:XP_006721389.1
DOMAINS: and other(s) domains
...
uncharacterized protein LOC100797045 [Glycine max]
894 aa protein
accession:XP_006588648.1
TATA box-binding protein-associated factor RNA polymerase I subunit C [Danio rerio]
994 aa protein
accession:XP_002665919.3
TATA box-binding protein-associated factor, RNA polymerase I, subunit C [Rattus norvegicus]
842 aa protein
accession:NP_001014177.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 1 [Mus musculus]
836 aa protein
accession:NP_067416.2
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3 [Homo sapiens]
843 aa protein
accession:NP_001230085.2
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X3 [Homo sapiens]
844 aa protein
accession:XP_006721389.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1676 | 1676 | 100% | 0.0 | 100.00% | XP_006721389.1 | |
2 | 1027 | 1027 | 100% | 0.0 | 66.47% | NP_001014177.1 | |
3 | 983 | 983 | 100% | 0.0 | 65.13% | NP_067416.2 | |
4 | 274 | 274 | 68% | 3e-77 | 31.61% | XP_002665919.3 | |
5 | 41.6 | 41.6 | 13% | 0.057 | 27.43% | XP_006588648.1 |