Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001230088.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 5 [Homo sapiens]
...
Query length:
460 aa
DOMAINS: and other(s) domains
...
TATA box-binding protein-associated factor RNA polymerase I subunit C
...
TATA box-binding protein-associated factor RNA polymerase I subunit C [Danio rerio]
994 aa protein
accession:XP_002665919.3
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 2
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 2 [Mus musculus]
646 aa protein
accession:NP_001365830.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X6
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X6 [Homo sapiens]
776 aa protein
accession:XP_016879336.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3 [Homo sapiens]
843 aa protein
accession:NP_001230085.2
Query: TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 5
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 5 [Homo sapiens]
460 aa protein
accession:NP_001230088.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X3
...
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X3 [Homo sapiens]
844 aa protein
accession:XP_006721389.1
DOMAINS: and other(s) domains
...
TATA box-binding protein-associated factor RNA polymerase I subunit C [Danio rerio]
994 aa protein
accession:XP_002665919.3
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 2 [Mus musculus]
646 aa protein
accession:NP_001365830.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X6 [Homo sapiens]
776 aa protein
accession:XP_016879336.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3 [Homo sapiens]
843 aa protein
accession:NP_001230085.2
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 5 [Homo sapiens]
460 aa protein
accession:NP_001230088.1
TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X3 [Homo sapiens]
844 aa protein
accession:XP_006721389.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 901 | 901 | 100% | 0.0 | 100.00% | XP_006721389.1 | |
| 2 | 441 | 441 | 100% | 2e-148 | 59.74% | NP_001365830.1 | |
| 3 | 115 | 115 | 40% | 8e-26 | 37.04% | XP_002665919.3 | |
| 4 | 900 | 900 | 100% | 0.0 | 100.00% | NP_001230085.2 | |
| 5 | 900 | 900 | 100% | 0.0 | 100.00% | XP_016879336.1 |