Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001243014.1 E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus] ... Query length: 667 aa

Protease-associated (PA) RING/U-box zinc finger family protein ...

Protease-associated (PA) RING/U-box zinc finger family protein [Arabidopsis thaliana]

422 aa protein

accession:NP_173681.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF6 ...

E3 ubiquitin-protein ligase RNF6 [Danio rerio]

797 aa protein

accession:XP_021329447.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF6 isoform 1 ...

E3 ubiquitin-protein ligase RNF6 isoform 1 [Homo sapiens]

685 aa protein

accession:NP_005968.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF6 isoform X2 ...

E3 ubiquitin-protein ligase RNF6 isoform X2 [Homo sapiens]

329 aa protein

accession:XP_047286450.1

Alignment Sequence Identical proteins

Query: E3 ubiquitin-protein ligase RNF6 isoform 1 ...

E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]

667 aa protein

accession:NP_001243014.1

Sequence Identical proteins

E3 ubiquitin-protein ligase RNF6 isoform 2 ...

E3 ubiquitin-protein ligase RNF6 isoform 2 [Mus musculus]

678 aa protein

accession:NP_001243015.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001243015.1\|	E3 ubiquitin-protein ligase RNF6 isoform 2 [Mus musculus]	1347	1347	100%	0.0	100.00%	NP_001243015.1
2 Select seq ref\|NP_005968.1\|	E3 ubiquitin-protein ligase RNF6 isoform 1 [Homo sapiens]	885	885	100%	0.0	72.20%	NP_005968.1
3 Select seq ref\|XP_021329447.1\|	E3 ubiquitin-protein ligase RNF6 [Danio rerio]	317	317	42%	4e-96	59.79%	XP_021329447.1
4 Select seq ref\|NP_173681.1\|	Protease-associated (PA) RING/U-box zinc finger family protein [Arabidopsis thaliana]	75.9	75.9	10%	4e-13	36.99%	NP_173681.1
5 Select seq ref\|XP_047286450.1\|	E3 ubiquitin-protein ligase RNF6 isoform X2 [Homo sapiens]	429	429	46%	2e-145	72.61%	XP_047286450.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments