Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001243014.1
E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
...
Query length:
667 aa
DOMAINS: and other(s) domains
...
hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein
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hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]
271 aa protein
accession:NP_001326258.1
E3 ubiquitin-protein ligase RLIM
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E3 ubiquitin-protein ligase RLIM [Danio rerio]
638 aa protein
accession:XP_009306042.1
E3 ubiquitin-protein ligase RLIM
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E3 ubiquitin-protein ligase RLIM [Mus musculus]
600 aa protein
accession:NP_001412889.1
E3 ubiquitin-protein ligase RNF6 isoform X2
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E3 ubiquitin-protein ligase RNF6 isoform X2 [Homo sapiens]
329 aa protein
accession:XP_047286450.1
Query: E3 ubiquitin-protein ligase RNF6 isoform 1
...
E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
667 aa protein
accession:NP_001243014.1
E3 ubiquitin-protein ligase RNF6 isoform X1
...
E3 ubiquitin-protein ligase RNF6 isoform X1 [Rattus norvegicus]
687 aa protein
accession:XP_063127321.1
DOMAINS: and other(s) domains
...
hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]
271 aa protein
accession:NP_001326258.1
E3 ubiquitin-protein ligase RLIM [Danio rerio]
638 aa protein
accession:XP_009306042.1
E3 ubiquitin-protein ligase RLIM [Mus musculus]
600 aa protein
accession:NP_001412889.1
E3 ubiquitin-protein ligase RNF6 isoform X2 [Homo sapiens]
329 aa protein
accession:XP_047286450.1
E3 ubiquitin-protein ligase RNF6 isoform 1 [Mus musculus]
667 aa protein
accession:NP_001243014.1
E3 ubiquitin-protein ligase RNF6 isoform X1 [Rattus norvegicus]
687 aa protein
accession:XP_063127321.1
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1141 | 1141 | 100% | 0.0 | 87.96% | XP_063127321.1 | |
| 2 | 429 | 429 | 46% | 8e-146 | 72.61% | XP_047286450.1 | |
| 3 | 276 | 418 | 61% | 5e-83 | 51.31% | XP_009306042.1 | |
| 4 | 160 | 291 | 41% | 5e-41 | 54.17% | NP_001412889.1 | |
| 5 | 73.2 | 73.2 | 13% | 3e-13 | 40.91% | NP_001326258.1 |