Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001243028.1
collagen triple helix repeat-containing protein 1 isoform 2 [Homo sapiens]
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Query length:
229 aa
DOMAINS: and other(s) domains
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Nematode cuticle collagen N-terminal domain-containing protein
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Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
289 aa protein
accession:NP_501561.1
collagen triple helix repeat-containing protein 1a precursor
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collagen triple helix repeat-containing protein 1a precursor [Danio rerio]
231 aa protein
accession:NP_001003765.1
Query: collagen triple helix repeat-containing protein 1 isoform 2
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collagen triple helix repeat-containing protein 1 isoform 2 [Homo sapiens]
229 aa protein
accession:NP_001243028.1
collagen triple helix repeat-containing protein 1 isoform 1 precursor
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collagen triple helix repeat-containing protein 1 isoform 1 precursor [Homo sapiens]
243 aa protein
accession:NP_612464.1
collagen triple helix repeat-containing protein 1 isoform 1 precursor
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collagen triple helix repeat-containing protein 1 isoform 1 precursor [Mus musculus]
245 aa protein
accession:NP_081054.1
collagen triple helix repeat-containing protein 1 isoform 3 precursor
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collagen triple helix repeat-containing protein 1 isoform 3 precursor [Mus musculus]
243 aa protein
accession:NP_001351742.1
DOMAINS: and other(s) domains
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
289 aa protein
accession:NP_501561.1
collagen triple helix repeat-containing protein 1a precursor [Danio rerio]
231 aa protein
accession:NP_001003765.1
collagen triple helix repeat-containing protein 1 isoform 2 [Homo sapiens]
229 aa protein
accession:NP_001243028.1
collagen triple helix repeat-containing protein 1 isoform 1 precursor [Homo sapiens]
243 aa protein
accession:NP_612464.1
collagen triple helix repeat-containing protein 1 isoform 1 precursor [Mus musculus]
245 aa protein
accession:NP_081054.1
collagen triple helix repeat-containing protein 1 isoform 3 precursor [Mus musculus]
243 aa protein
accession:NP_001351742.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 400 | 400 | 84% | 4e-142 | 100.00% | NP_612464.1 | |
| 2 | 399 | 399 | 95% | 9e-142 | 89.50% | NP_081054.1 | |
| 3 | 345 | 345 | 93% | 2e-120 | 77.46% | NP_001003765.1 | |
| 4 | 42.0 | 42.0 | 17% | 0.002 | 46.30% | NP_501561.1 | |
| 5 | 390 | 390 | 95% | 4e-138 | 88.58% | NP_001351742.1 |