Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001246781.1 pH-sensitive chloride channel 1, isoform H [Drosophila melanogaster] ... Query length: 762 aa

Ig-like domain-containing protein ...

Ig-like domain-containing protein [Caenorhabditis elegans]

430 aa protein

accession:NP_001020963.1

Alignment Sequence Identical proteins

glycine receptor subunit alpha-2 isoform X1 ...

glycine receptor subunit alpha-2 isoform X1 [Danio rerio]

448 aa protein

accession:XP_021334452.1

Alignment Sequence Identical proteins

glycine receptor subunit alpha-3 isoform X3 ...

glycine receptor subunit alpha-3 isoform X3 [Homo sapiens]

409 aa protein

accession:XP_047272153.1

Alignment Sequence Identical proteins

glycine receptor subunit alpha-3 isoform X1 ...

glycine receptor subunit alpha-3 isoform X1 [Rattus norvegicus]

465 aa protein

accession:XP_063131053.1

Alignment Sequence Identical proteins

Query: pH-sensitive chloride channel 1, isoform H ...

pH-sensitive chloride channel 1, isoform H [Drosophila melanogaster]

762 aa protein

accession:NP_001246781.1

Sequence Identical proteins

pH-sensitive chloride channel 1, isoform E ...

pH-sensitive chloride channel 1, isoform E [Drosophila melanogaster]

762 aa protein

accession:NP_001034025.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001034025.2\|	pH-sensitive chloride channel 1, isoform E [Drosophila melanogaster]	1596	1596	100%	0.0	99.34%	NP_001034025.2
2 Select seq ref\|NP_001020963.1\|	Ig-like domain-containing protein [Caenorhabditis elegans]	209	209	50%	1e-58	32.24%	NP_001020963.1
3 Select seq ref\|XP_021334452.1\|	glycine receptor subunit alpha-2 isoform X1 [Danio rerio]	202	202	49%	5e-56	31.43%	XP_021334452.1
4 Select seq ref\|XP_047272153.1\|	glycine receptor subunit alpha-3 isoform X3 [Homo sapiens]	201	201	49%	6e-56	32.99%	XP_047272153.1
5 Select seq ref\|XP_063131053.1\|	glycine receptor subunit alpha-3 isoform X1 [Rattus norvegicus]	200	200	52%	4e-55	32.29%	XP_063131053.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments