Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001247237.1
RNA polymerase III subunit F, isoform B [Drosophila melanogaster]
...
Query length:
293 aa
DOMAINS: and other(s) domains
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putative DNA-directed RNA polymerase III subunit RPC6
...
putative DNA-directed RNA polymerase III subunit RPC6 [Caenorhabditis elegans]
296 aa protein
accession:NP_491427.1
Query: RNA polymerase III subunit F, isoform B
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RNA polymerase III subunit F, isoform B [Drosophila melanogaster]
293 aa protein
accession:NP_001247237.1
DNA-directed RNA polymerase III subunit RPC6 isoform 1
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DNA-directed RNA polymerase III subunit RPC6 isoform 1 [Homo sapiens]
316 aa protein
accession:NP_006457.2
DNA-directed RNA polymerase III subunit RPC6
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DNA-directed RNA polymerase III subunit RPC6 [Mus musculus]
316 aa protein
accession:NP_084039.2
DNA-directed RNA polymerase III subunit RPC6
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DNA-directed RNA polymerase III subunit RPC6 [Rattus norvegicus]
371 aa protein
accession:NP_001101254.1
DNA-directed RNA polymerase III subunit RPC6
...
DNA-directed RNA polymerase III subunit RPC6 [Danio rerio]
314 aa protein
accession:NP_957481.1
DOMAINS: and other(s) domains
...
putative DNA-directed RNA polymerase III subunit RPC6 [Caenorhabditis elegans]
296 aa protein
accession:NP_491427.1
RNA polymerase III subunit F, isoform B [Drosophila melanogaster]
293 aa protein
accession:NP_001247237.1
DNA-directed RNA polymerase III subunit RPC6 isoform 1 [Homo sapiens]
316 aa protein
accession:NP_006457.2
DNA-directed RNA polymerase III subunit RPC6 [Mus musculus]
316 aa protein
accession:NP_084039.2
DNA-directed RNA polymerase III subunit RPC6 [Rattus norvegicus]
371 aa protein
accession:NP_001101254.1
DNA-directed RNA polymerase III subunit RPC6 [Danio rerio]
314 aa protein
accession:NP_957481.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 303 | 303 | 98% | 9e-102 | 49.67% | NP_006457.2 | |
| 2 | 303 | 303 | 98% | 9e-102 | 49.67% | NP_084039.2 | |
| 3 | 300 | 300 | 95% | 1e-100 | 51.38% | NP_957481.1 | |
| 4 | 302 | 302 | 98% | 2e-100 | 49.67% | NP_001101254.1 | |
| 5 | 168 | 168 | 99% | 3e-49 | 33.79% | NP_491427.1 |