Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001254374.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
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Query length:
323 aa
DOMAINS: and other(s) domains
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Nematode cuticle collagen N-terminal domain-containing protein
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Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
394 aa protein
accession:NP_493702.1
collagen alpha-3(VI) chain isoform X3
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collagen alpha-3(VI) chain isoform X3 [Danio rerio]
12763 aa protein
accession:XP_068074648.1
Nematode cuticle collagen N-terminal domain-containing protein
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Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
302 aa protein
accession:NP_492013.1
Cuticle collagen dpy-5
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Cuticle collagen dpy-5 [Caenorhabditis elegans]
284 aa protein
accession:NP_491595.1
Query: Nematode cuticle collagen N-terminal domain-containing protein
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Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
323 aa protein
accession:NP_001254374.1
Collagen triple helix repeat protein
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Collagen triple helix repeat protein [Caenorhabditis elegans]
178 aa protein
accession:NP_001254375.1
DOMAINS: and other(s) domains
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
394 aa protein
accession:NP_493702.1
collagen alpha-3(VI) chain isoform X3 [Danio rerio]
12763 aa protein
accession:XP_068074648.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
302 aa protein
accession:NP_492013.1
Cuticle collagen dpy-5 [Caenorhabditis elegans]
284 aa protein
accession:NP_491595.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
323 aa protein
accession:NP_001254374.1
Collagen triple helix repeat protein [Caenorhabditis elegans]
178 aa protein
accession:NP_001254375.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 337 | 337 | 55% | 2e-116 | 100.00% | NP_001254375.1 | |
| 2 | 103 | 285 | 54% | 9e-23 | 35.27% | XP_068074648.1 | |
| 3 | 122 | 122 | 85% | 2e-31 | 35.19% | NP_491595.1 | |
| 4 | 122 | 122 | 98% | 2e-30 | 32.72% | NP_493702.1 | |
| 5 | 120 | 120 | 86% | 3e-30 | 36.21% | NP_492013.1 |