Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001254397.1
Geranylgeranyl transferase type-1 subunit beta [Caenorhabditis elegans]
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Query length:
360 aa
DOMAINS: and other(s) domains
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geranylgeranyl transferase type-1 subunit beta
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geranylgeranyl transferase type-1 subunit beta [Danio rerio]
355 aa protein
accession:NP_001025426.1
geranylgeranyl transferase type-1 subunit beta
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geranylgeranyl transferase type-1 subunit beta [Rattus norvegicus]
377 aa protein
accession:NP_112344.1
geranylgeranyl transferase type-1 subunit beta isoform 1
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geranylgeranyl transferase type-1 subunit beta isoform 1 [Mus musculus]
377 aa protein
accession:NP_766215.1
geranylgeranyl transferase type-1 subunit beta isoform X2
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geranylgeranyl transferase type-1 subunit beta isoform X2 [Homo sapiens]
381 aa protein
accession:XP_005272077.2
Query: Geranylgeranyl transferase type-1 subunit beta
...
Geranylgeranyl transferase type-1 subunit beta [Caenorhabditis elegans]
360 aa protein
accession:NP_001254397.1
Geranylgeranyl transferase type I subunit beta
...
Geranylgeranyl transferase type I subunit beta [Caenorhabditis elegans]
195 aa protein
accession:NP_001254400.1
DOMAINS: and other(s) domains
...
geranylgeranyl transferase type-1 subunit beta [Danio rerio]
355 aa protein
accession:NP_001025426.1
geranylgeranyl transferase type-1 subunit beta [Rattus norvegicus]
377 aa protein
accession:NP_112344.1
geranylgeranyl transferase type-1 subunit beta isoform 1 [Mus musculus]
377 aa protein
accession:NP_766215.1
geranylgeranyl transferase type-1 subunit beta isoform X2 [Homo sapiens]
381 aa protein
accession:XP_005272077.2
Geranylgeranyl transferase type-1 subunit beta [Caenorhabditis elegans]
360 aa protein
accession:NP_001254397.1
Geranylgeranyl transferase type I subunit beta [Caenorhabditis elegans]
195 aa protein
accession:NP_001254400.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 410 | 410 | 54% | 7e-145 | 100.00% | NP_001254400.1 | |
| 2 | 270 | 270 | 93% | 3e-87 | 41.46% | NP_001025426.1 | |
| 3 | 271 | 271 | 98% | 4e-87 | 40.70% | NP_112344.1 | |
| 4 | 270 | 270 | 98% | 7e-87 | 40.70% | NP_766215.1 | |
| 5 | 269 | 269 | 98% | 2e-86 | 40.43% | XP_005272077.2 |