Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001256981.1 LIM/homeobox protein lim-6 [Caenorhabditis elegans] ... Query length: 310 aa

LIM homeobox transcription factor 1-beta ...

LIM homeobox transcription factor 1-beta [Mus musculus]

401 aa protein

accession:NP_034855.3

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1-beta ...

LIM homeobox transcription factor 1-beta [Rattus norvegicus]

402 aa protein

accession:NP_446161.1

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1-beta isoform 1 ...

LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]

395 aa protein

accession:NP_002307.2

Alignment Sequence Identical proteins

LIM homeobox transcription factor 1, beta b ...

LIM homeobox transcription factor 1, beta b [Danio rerio]

375 aa protein

accession:NP_001020338.2

Alignment Sequence Identical proteins

Query: LIM/homeobox protein lim-6 ...

LIM/homeobox protein lim-6 [Caenorhabditis elegans]

310 aa protein

accession:NP_001256981.1

Sequence Identical proteins

LIM/homeobox protein lim-6 ...

LIM/homeobox protein lim-6 [Caenorhabditis elegans]

316 aa protein

accession:NP_001256980.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001256980.1\|	LIM/homeobox protein lim-6 [Caenorhabditis elegans]	584	584	90%	0.0	99.64%	NP_001256980.1
2 Select seq ref\|NP_034855.3\|	LIM homeobox transcription factor 1-beta [Mus musculus]	194	194	73%	5e-58	41.04%	NP_034855.3
3 Select seq ref\|NP_002307.2\|	LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]	194	194	73%	6e-58	41.04%	NP_002307.2
4 Select seq ref\|NP_446161.1\|	LIM homeobox transcription factor 1-beta [Rattus norvegicus]	194	194	73%	9e-58	41.04%	NP_446161.1
5 Select seq ref\|NP_001020338.2\|	LIM homeobox transcription factor 1, beta b [Danio rerio]	191	191	72%	1e-56	41.56%	NP_001020338.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments