Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001258796.1
general transcription factor IIH subunit 3 isoform c [Homo sapiens]
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Query length:
267 aa
DOMAINS: and other(s) domains
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general transcription factor IIH subunit 2
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general transcription factor IIH subunit 2 [Plasmodium falciparum 3D7]
401 aa protein
accession:XP_001349885.1
RNA polymerase II transcription factor B subunit 4, putative
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RNA polymerase II transcription factor B subunit 4, putative [Plasmodium falciparum 3D7]
326 aa protein
accession:XP_001350247.1
TFIIH/NER complex subunit TFB4
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TFIIH/NER complex subunit TFB4 [Saccharomyces cerevisiae S288C]
338 aa protein
accession:NP_015381.1
general transcription factor IIH subunit 3
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general transcription factor IIH subunit 3 [Danio rerio]
296 aa protein
accession:NP_001121894.1
Query: general transcription factor IIH subunit 3 isoform c
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general transcription factor IIH subunit 3 isoform c [Homo sapiens]
267 aa protein
accession:NP_001258796.1
general transcription factor IIH subunit 3 isoform X1
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general transcription factor IIH subunit 3 isoform X1 [Rattus norvegicus]
309 aa protein
accession:XP_063127243.1
DOMAINS: and other(s) domains
...
general transcription factor IIH subunit 2 [Plasmodium falciparum 3D7]
401 aa protein
accession:XP_001349885.1
RNA polymerase II transcription factor B subunit 4, putative [Plasmodium falciparum 3D7]
326 aa protein
accession:XP_001350247.1
TFIIH/NER complex subunit TFB4 [Saccharomyces cerevisiae S288C]
338 aa protein
accession:NP_015381.1
general transcription factor IIH subunit 3 [Danio rerio]
296 aa protein
accession:NP_001121894.1
general transcription factor IIH subunit 3 isoform c [Homo sapiens]
267 aa protein
accession:NP_001258796.1
general transcription factor IIH subunit 3 isoform X1 [Rattus norvegicus]
309 aa protein
accession:XP_063127243.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 508 | 508 | 99% | 0.0 | 94.38% | XP_063127243.1 | |
| 2 | 380 | 380 | 94% | 5e-133 | 71.94% | NP_001121894.1 | |
| 3 | 133 | 133 | 98% | 5e-36 | 32.16% | NP_015381.1 | |
| 4 | 90.5 | 90.5 | 63% | 3e-20 | 31.05% | XP_001350247.1 | |
| 5 | 40.8 | 40.8 | 41% | 0.004 | 25.83% | XP_001349885.1 |