Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001259814.1 U2 small nuclear riboprotein auxiliary factor 38, isoform B [Drosophila melanogaster] ... Query length: 264 aa

splicing factor U2af small subunit B ...

splicing factor U2af small subunit B [Glycine max]

314 aa protein

accession:XP_003521439.1

Alignment Sequence Identical proteins

Splicing factor U2AF 35 kDa subunit ...

Splicing factor U2AF 35 kDa subunit [Caenorhabditis elegans]

285 aa protein

accession:NP_503036.1

Alignment Sequence Identical proteins

Query: U2 small nuclear riboprotein auxiliary factor 38, isoform B ...

U2 small nuclear riboprotein auxiliary factor 38, isoform B [Drosophila melanogaster]

264 aa protein

accession:NP_001259814.1

Sequence Identical proteins

splicing factor U2AF 35 kDa subunit isoform 2 ...

splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]

239 aa protein

accession:NP_001157241.1

Alignment Sequence Identical proteins

splicing factor U2AF 35 kDa subunit isoform b ...

splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]

240 aa protein

accession:NP_001020374.1

Alignment Sequence Identical proteins

splicing factor U2AF 26 kDa subunit ...

splicing factor U2AF 26 kDa subunit [Rattus norvegicus]

220 aa protein

accession:NP_001008775.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001157241.1\|	splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]	341	341	71%	2e-118	84.04%	NP_001157241.1
2 Select seq ref\|NP_001020374.1\|	splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]	341	341	71%	3e-118	84.04%	NP_001020374.1
3 Select seq ref\|NP_001008775.1\|	splicing factor U2AF 26 kDa subunit [Rattus norvegicus]	337	337	82%	5e-117	75.91%	NP_001008775.1
4 Select seq ref\|NP_503036.1\|	Splicing factor U2AF 35 kDa subunit [Caenorhabditis elegans]	268	268	76%	1e-88	62.56%	NP_503036.1
5 Select seq ref\|XP_003521439.1\|	splicing factor U2af small subunit B [Glycine max]	249	249	85%	5e-81	54.66%	XP_003521439.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments