Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001260000.1 shaker cognate w, isoform D [Drosophila melanogaster] ... Query length: 510 aa

shaker, isoform U ...

shaker, isoform U [Drosophila melanogaster]

587 aa protein

accession:NP_001401061.1

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily C member 1a ...

potassium voltage-gated channel subfamily C member 1a [Danio rerio]

605 aa protein

accession:NP_001122197.1

Alignment Sequence Identical proteins

voltage-gated potassium channel KCNC2 isoform 11 ...

voltage-gated potassium channel KCNC2 isoform 11 [Homo sapiens]

559 aa protein

accession:NP_001401128.1

Alignment Sequence Identical proteins

potassium voltage-gated channel subfamily C member 2 isoform X3 ...

potassium voltage-gated channel subfamily C member 2 isoform X3 [Mus musculus]

617 aa protein

accession:XP_036011684.1

Alignment Sequence Identical proteins

Query: shaker cognate w, isoform D ...

shaker cognate w, isoform D [Drosophila melanogaster]

510 aa protein

accession:NP_001260000.1

Sequence Identical proteins

BTB domain-containing protein ...

BTB domain-containing protein [Caenorhabditis elegans]

589 aa protein

accession:NP_001367032.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001367032.1\|	BTB domain-containing protein [Caenorhabditis elegans]	592	592	87%	0.0	62.61%	NP_001367032.1
2 Select seq ref\|NP_001122197.1\|	potassium voltage-gated channel subfamily C member 1a [Danio rerio]	436	436	90%	1e-146	48.16%	NP_001122197.1
3 Select seq ref\|NP_001401128.1\|	voltage-gated potassium channel KCNC2 isoform 11 [Homo sapiens]	433	433	85%	3e-146	47.11%	NP_001401128.1
4 Select seq ref\|XP_036011684.1\|	potassium voltage-gated channel subfamily C member 2 isoform X3 [Mus musculus]	422	472	84%	3e-141	53.35%	XP_036011684.1
5 Select seq ref\|NP_001401061.1\|	shaker, isoform U [Drosophila melanogaster]	278	278	83%	1e-85	36.97%	NP_001401061.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments