Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001260712.1
CCR4-NOT transcription complex subunit 3, isoform B [Drosophila melanogaster]
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Query length:
844 aa
DOMAINS: and other(s) domains
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general negative regulator of transcription subunit 3
...
general negative regulator of transcription subunit 3 [Glycine max]
886 aa protein
accession:XP_006599434.1
Query: CCR4-NOT transcription complex subunit 3, isoform B
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CCR4-NOT transcription complex subunit 3, isoform B [Drosophila melanogaster]
844 aa protein
accession:NP_001260712.1
CCR4-NOT transcription complex subunit 3b
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CCR4-NOT transcription complex subunit 3b [Danio rerio]
908 aa protein
accession:NP_956134.1
CCR4-NOT transcription complex subunit 3 isoform X8
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CCR4-NOT transcription complex subunit 3 isoform X8 [Homo sapiens]
681 aa protein
accession:XP_047294836.1
CCR4-NOT transcription complex subunit 3
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CCR4-NOT transcription complex subunit 3 [Rattus norvegicus]
751 aa protein
accession:NP_001100941.2
CCR4-NOT transcription complex subunit 3
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CCR4-NOT transcription complex subunit 3 [Mus musculus]
751 aa protein
accession:NP_666288.1
DOMAINS: and other(s) domains
...
general negative regulator of transcription subunit 3 [Glycine max]
886 aa protein
accession:XP_006599434.1
CCR4-NOT transcription complex subunit 3, isoform B [Drosophila melanogaster]
844 aa protein
accession:NP_001260712.1
CCR4-NOT transcription complex subunit 3b [Danio rerio]
908 aa protein
accession:NP_956134.1
CCR4-NOT transcription complex subunit 3 isoform X8 [Homo sapiens]
681 aa protein
accession:XP_047294836.1
CCR4-NOT transcription complex subunit 3 [Rattus norvegicus]
751 aa protein
accession:NP_001100941.2
CCR4-NOT transcription complex subunit 3 [Mus musculus]
751 aa protein
accession:NP_666288.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 358 | 358 | 30% | 1e-108 | 64.31% | NP_956134.1 | |
| 2 | 335 | 451 | 42% | 2e-102 | 63.78% | XP_047294836.1 | |
| 3 | 335 | 598 | 49% | 1e-101 | 64.17% | NP_001100941.2 | |
| 4 | 335 | 598 | 49% | 2e-101 | 64.17% | NP_666288.1 | |
| 5 | 250 | 419 | 44% | 2e-69 | 51.38% | XP_006599434.1 |