Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001263953.1 Nuclear hormone receptor family member fax-1 [Caenorhabditis elegans] ... Query length: 390 aa

Query: Nuclear hormone receptor family member fax-1 ...

Nuclear hormone receptor family member fax-1 [Caenorhabditis elegans]

390 aa protein

accession:NP_001263953.1

Sequence Identical proteins

nuclear receptor subfamily 2 group E member 1 isoform X1 ...

nuclear receptor subfamily 2 group E member 1 isoform X1 [Mus musculus]

381 aa protein

accession:XP_036011658.1

Alignment Sequence Identical proteins

nuclear receptor subfamily 2 group E member 1 ...

nuclear receptor subfamily 2 group E member 1 [Rattus norvegicus]

385 aa protein

accession:NP_001106668.2

Alignment Sequence Identical proteins

seven up, isoform F ...

seven up, isoform F [Drosophila melanogaster]

826 aa protein

accession:NP_001369011.1

Alignment Sequence Identical proteins

retinoic acid receptor RXR-beta isoform 2 ...

retinoic acid receptor RXR-beta isoform 2 [Homo sapiens]

533 aa protein

accession:NP_068811.1

Alignment Sequence Identical proteins

photoreceptor-specific nuclear receptor ...

photoreceptor-specific nuclear receptor [Danio rerio]

426 aa protein

accession:NP_001007369.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001007369.2\|	photoreceptor-specific nuclear receptor [Danio rerio]	172	172	26%	1e-48	76.42%	NP_001007369.2
2 Select seq ref\|NP_001369011.1\|	seven up, isoform F [Drosophila melanogaster]	143	143	72%	2e-36	31.79%	NP_001369011.1
3 Select seq ref\|XP_036011658.1\|	nuclear receptor subfamily 2 group E member 1 isoform X1 [Mus musculus]	135	135	65%	2e-35	31.71%	XP_036011658.1
4 Select seq ref\|NP_001106668.2\|	nuclear receptor subfamily 2 group E member 1 [Rattus norvegicus]	135	135	65%	3e-35	31.71%	NP_001106668.2
5 Select seq ref\|NP_068811.1\|	retinoic acid receptor RXR-beta isoform 2 [Homo sapiens]	123	123	72%	8e-30	29.68%	NP_068811.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments