Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001265350.1 cytoplasmic dynein 1 intermediate chain 1 isoform d [Homo sapiens] ... Query length: 625 aa

WD_REPEATS_REGION domain-containing protein ...

WD_REPEATS_REGION domain-containing protein [Caenorhabditis elegans]

639 aa protein

accession:NP_001360494.1

Alignment Sequence Identical proteins

short wing, isoform N ...

short wing, isoform N [Drosophila melanogaster]

634 aa protein

accession:NP_001285486.1

Alignment Sequence Identical proteins

cytoplasmic dynein 1 intermediate chain 2 isoform 2 ...

cytoplasmic dynein 1 intermediate chain 2 isoform 2 [Homo sapiens]

630 aa protein

accession:NP_001258715.1

Alignment Sequence Identical proteins

cytoplasmic dynein 1 intermediate chain 1 ...

cytoplasmic dynein 1 intermediate chain 1 [Danio rerio]

608 aa protein

accession:XP_021326617.1

Alignment Sequence Identical proteins

Query: cytoplasmic dynein 1 intermediate chain 1 isoform d ...

cytoplasmic dynein 1 intermediate chain 1 isoform d [Homo sapiens]

625 aa protein

accession:NP_001265350.1

Sequence Identical proteins

cytoplasmic dynein 1 intermediate chain 1 isoform 6 ...

cytoplasmic dynein 1 intermediate chain 1 isoform 6 [Mus musculus]

645 aa protein

accession:NP_001396540.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001396540.1\|	cytoplasmic dynein 1 intermediate chain 1 isoform 6 [Mus musculus]	1276	1276	100%	0.0	95.04%	NP_001396540.1
2 Select seq ref\|XP_021326617.1\|	cytoplasmic dynein 1 intermediate chain 1 [Danio rerio]	1003	1003	99%	0.0	80.48%	XP_021326617.1
3 Select seq ref\|NP_001258715.1\|	cytoplasmic dynein 1 intermediate chain 2 isoform 2 [Homo sapiens]	942	942	100%	0.0	76.58%	NP_001258715.1
4 Select seq ref\|NP_001285486.1\|	short wing, isoform N [Drosophila melanogaster]	602	602	97%	0.0	48.77%	NP_001285486.1
5 Select seq ref\|NP_001360494.1\|	WD_REPEATS_REGION domain-containing protein [Caenorhabditis elegans]	403	403	97%	7e-132	37.19%	NP_001360494.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments