Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001267646.1
mamu class II histocompatibility antigen, DR alpha chain-like precursor [Ovis aries]
...
Query length:
253 aa
DOMAINS: and other(s) domains
...
uncharacterized protein LOC368614 precursor
...
uncharacterized protein LOC368614 precursor [Danio rerio]
236 aa protein
accession:NP_001007206.1
histocompatibility 2, class II antigen A, alpha precursor
...
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DO alpha chain precursor
...
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor
...
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
Query: mamu class II histocompatibility antigen, DR alpha chain-like precursor
...
mamu class II histocompatibility antigen, DR alpha chain-like precursor [Ovis aries]
253 aa protein
accession:NP_001267646.1
HLA class II histocompatibility antigen, DR alpha chain precursor
...
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
DOMAINS: and other(s) domains
...
uncharacterized protein LOC368614 precursor [Danio rerio]
236 aa protein
accession:NP_001007206.1
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
mamu class II histocompatibility antigen, DR alpha chain-like precursor [Ovis aries]
253 aa protein
accession:NP_001267646.1
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 405 | 405 | 100% | 1e-143 | 81.10% | NP_061984.2 | |
2 | 283 | 283 | 100% | 2e-95 | 54.69% | NP_034508.2 | |
3 | 120 | 120 | 92% | 1e-31 | 32.63% | NP_001007206.1 | |
4 | 278 | 278 | 90% | 4e-93 | 59.13% | NP_001229453.1 | |
5 | 277 | 277 | 94% | 5e-93 | 54.13% | NP_002110.1 |