Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001268422.1 DNA mismatch repair protein Msh6 isoform 3 [Homo sapiens] ... Query length: 1058 aa

hypothetical protein DDB_G0268614 ...

hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]

1260 aa protein

accession:XP_647085.1

Alignment Sequence Identical proteins

DNA mismatch repair protein ...

DNA mismatch repair protein [Schizosaccharomyces pombe]

1254 aa protein

accession:NP_588344.1

Alignment Sequence Identical proteins

mismatch repair ATPase MSH6 ...

mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288C]

1242 aa protein

accession:NP_010382.3

Alignment Sequence Identical proteins

DNA mismatch repair protein Msh6 isoform X1 ...

DNA mismatch repair protein Msh6 isoform X1 [Danio rerio]

1296 aa protein

accession:XP_068080998.1

Alignment Sequence Identical proteins

Query: DNA mismatch repair protein Msh6 isoform 3 ...

DNA mismatch repair protein Msh6 isoform 3 [Homo sapiens]

1058 aa protein

accession:NP_001268422.1

Sequence Identical proteins

DNA mismatch repair protein Msh6 isoform 14 ...

DNA mismatch repair protein Msh6 isoform 14 [Homo sapiens]

1185 aa protein

accession:NP_001393728.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001393728.1\|	DNA mismatch repair protein Msh6 isoform 14 [Homo sapiens]	2209	2209	100%	0.0	100.00%	NP_001393728.1
2 Select seq ref\|XP_068080998.1\|	DNA mismatch repair protein Msh6 isoform X1 [Danio rerio]	1497	1497	99%	0.0	67.33%	XP_068080998.1
3 Select seq ref\|XP_647085.1\|	hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]	583	583	89%	0.0	35.67%	XP_647085.1
4 Select seq ref\|NP_588344.1\|	DNA mismatch repair protein [Schizosaccharomyces pombe]	558	558	97%	8e-179	33.11%	NP_588344.1
5 Select seq ref\|NP_010382.3\|	mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288C]	516	516	97%	6e-163	33.05%	NP_010382.3

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments