Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001274685.1 squalene synthase isoform 5 [Homo sapiens] ... Query length: 250 aa

bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase ...

bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase [Saccharomyces cerevisiae S288C]

444 aa protein

accession:NP_012060.1

Alignment Sequence Identical proteins

squalene synthase 1 ...

squalene synthase 1 [Arabidopsis thaliana]

355 aa protein

accession:NP_001329728.1

Alignment Sequence Identical proteins

farnesyl-diphosphate farnesyltransferase ...

farnesyl-diphosphate farnesyltransferase [Dictyostelium discoideum AX4]

416 aa protein

accession:XP_629811.1

Alignment Sequence Identical proteins

squalene synthase isoform X2 ...

squalene synthase isoform X2 [Mus musculus]

322 aa protein

accession:XP_036014350.1

Alignment Sequence Identical proteins

Query: squalene synthase isoform 5 ...

squalene synthase isoform 5 [Homo sapiens]

250 aa protein

accession:NP_001274685.1

Sequence Identical proteins

squalene synthase isoform 4 ...

squalene synthase isoform 4 [Homo sapiens]

332 aa protein

accession:NP_001274680.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001274680.1\|	squalene synthase isoform 4 [Homo sapiens]	479	479	91%	4e-172	100.00%	NP_001274680.1
2 Select seq ref\|XP_036014350.1\|	squalene synthase isoform X2 [Mus musculus]	434	434	91%	3e-154	89.96%	XP_036014350.1
3 Select seq ref\|NP_001329728.1\|	squalene synthase 1 [Arabidopsis thaliana]	179	179	79%	7e-54	42.79%	NP_001329728.1
4 Select seq ref\|XP_629811.1\|	farnesyl-diphosphate farnesyltransferase [Dictyostelium discoideum AX4]	177	177	72%	3e-52	49.18%	XP_629811.1
5 Select seq ref\|NP_012060.1\|	bifunctional farnesyl-diphosphate farnesyltransferase/squalene synthase [Saccharomyces cerevisiae S288C]	173	173	64%	1e-50	51.55%	NP_012060.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments