Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001275338.1
protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum]
...
Query length:
293 aa
DOMAINS: and other(s) domains
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phosphatidylinositol binding clathrin assembly protein b isoform X8
...
phosphatidylinositol binding clathrin assembly protein b isoform X8 [Danio rerio]
700 aa protein
accession:XP_009289913.1
protein THYLAKOID FORMATION1, chloroplastic
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protein THYLAKOID FORMATION1, chloroplastic [Glycine max]
297 aa protein
accession:XP_003540338.1
Query: protein THYLAKOID FORMATION1, chloroplastic
...
protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum]
293 aa protein
accession:NP_001275338.1
photosystem II reaction center PSB29 protein
...
photosystem II reaction center PSB29 protein [Arabidopsis thaliana]
300 aa protein
accession:NP_565491.1
photosystem II biogenesis protein Psp29
...
photosystem II biogenesis protein Psp29 [Microcystis]
228 aa protein
accession:WP_192846022.1
photosystem II biogenesis protein Psp29
...
photosystem II biogenesis protein Psp29 [Synechocystis]
240 aa protein
accession:WP_194020440.1
DOMAINS: and other(s) domains
...
phosphatidylinositol binding clathrin assembly protein b isoform X8 [Danio rerio]
700 aa protein
accession:XP_009289913.1
protein THYLAKOID FORMATION1, chloroplastic [Glycine max]
297 aa protein
accession:XP_003540338.1
protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum]
293 aa protein
accession:NP_001275338.1
photosystem II reaction center PSB29 protein [Arabidopsis thaliana]
300 aa protein
accession:NP_565491.1
photosystem II biogenesis protein Psp29 [Microcystis]
228 aa protein
accession:WP_192846022.1
photosystem II biogenesis protein Psp29 [Synechocystis]
240 aa protein
accession:WP_194020440.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 432 | 432 | 97% | 1e-152 | 71.48% | XP_003540338.1 | |
| 2 | 425 | 425 | 98% | 5e-150 | 71.03% | NP_565491.1 | |
| 3 | 131 | 131 | 71% | 9e-36 | 35.78% | WP_192846022.1 | |
| 4 | 115 | 115 | 69% | 1e-29 | 34.86% | WP_194020440.1 | |
| 5 | 37.7 | 37.7 | 74% | 0.14 | 23.20% | XP_009289913.1 |