Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: NP_001277754.1 collagen alpha-1(XVII) chain isoform 1 [Mus musculus] ... Query length: 1470 aa
collagen alpha-4(VI) chain isoform X1 ...
collagen alpha-4(VI) chain isoform X1 [Mus musculus]
2309 aa protein
accession:XP_036011120.1
collagen alpha-1(XXI) chain isoform X1 ...
collagen alpha-1(XXI) chain isoform X1 [Homo sapiens]
957 aa protein
accession:XP_047275339.1
collagen alpha-1(XXIV) chain isoform X1 ...
collagen alpha-1(XXIV) chain isoform X1 [Rattus norvegicus]
1731 aa protein
accession:XP_063138993.1
collagen-like exosporium glycoprotein BclA1 ...
collagen-like exosporium glycoprotein BclA1 [Clostridioides difficile]
681 aa protein
accession:WP_021368890.1
Query: collagen alpha-1(XVII) chain isoform 1 ...
collagen alpha-1(XVII) chain isoform 1 [Mus musculus]
1470 aa protein
accession:NP_001277754.1
collagen, type XVII, alpha 1a isoform X2 ...
collagen, type XVII, alpha 1a isoform X2 [Danio rerio]
1413 aa protein
accession:XP_017210406.1

Descriptions

Best hits

Select:AllNone Selected:0
Alignments Download
GenPept Show/hide columns of the table presenting best hits
Available columns







Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
collagen, type XVII, alpha 1a isoform X2 [Danio rerio]
382 472 79% 2e-10938.54% XP_017210406.1
2
collagen alpha-4(VI) chain isoform X1 [Mus musculus]
179 261 34% 4e-4438.78% XP_036011120.1
3
collagen alpha-1(XXIV) chain isoform X1 [Rattus norvegicus]
159 1072 32% 4e-3839.88% XP_063138993.1
4
collagen alpha-1(XXI) chain isoform X1 [Homo sapiens]
140 832 35% 1e-3242.70% XP_047275339.1
5
collagen-like exosporium glycoprotein BclA1 [Clostridioides difficile]
139 139 26% 1e-3238.42% WP_021368890.1