Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001285876.1 nubbin, isoform E [Drosophila melanogaster] ... Query length: 601 aa

POU domain, class 2, transcription factor 2 isoform 4 ...

POU domain, class 2, transcription factor 2 isoform 4 [Homo sapiens]

400 aa protein

accession:NP_001234923.1

Alignment Sequence Identical proteins

POU domain, class 2, transcription factor 2 isoform X27 ...

POU domain, class 2, transcription factor 2 isoform X27 [Rattus norvegicus]

424 aa protein

accession:XP_063123594.1

Alignment Sequence Identical proteins

POU domain, class 2, transcription factor 2 isoform 10 ...

POU domain, class 2, transcription factor 2 isoform 10 [Mus musculus]

424 aa protein

accession:NP_001404069.1

Alignment Sequence Identical proteins

POU domain, class 2, transcription factor 1b isoform X8 ...

POU domain, class 2, transcription factor 1b isoform X8 [Danio rerio]

694 aa protein

accession:XP_017213140.1

Alignment Sequence Identical proteins

Query: nubbin, isoform E ...

nubbin, isoform E [Drosophila melanogaster]

601 aa protein

accession:NP_001285876.1

Sequence Identical proteins

nubbin, isoform B ...

nubbin, isoform B [Drosophila melanogaster]

961 aa protein

accession:NP_001097153.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001097153.1\|	nubbin, isoform B [Drosophila melanogaster]	1139	1139	92%	0.0	100.00%	NP_001097153.1
2 Select seq ref\|XP_063123594.1\|	POU domain, class 2, transcription factor 2 isoform X27 [Rattus norvegicus]	265	265	32%	5e-81	67.34%	XP_063123594.1
3 Select seq ref\|NP_001234923.1\|	POU domain, class 2, transcription factor 2 isoform 4 [Homo sapiens]	264	264	32%	5e-81	67.34%	NP_001234923.1
4 Select seq ref\|NP_001404069.1\|	POU domain, class 2, transcription factor 2 isoform 10 [Mus musculus]	264	264	32%	7e-81	67.34%	NP_001404069.1
5 Select seq ref\|XP_017213140.1\|	POU domain, class 2, transcription factor 1b isoform X8 [Danio rerio]	271	271	27%	1e-80	76.19%	XP_017213140.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments