Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001286429.1
Pcf11 cleavage and polyadenylation factor subunit, isoform G [Drosophila melanogaster]
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Query length:
1945 aa
DOMAINS: and other(s) domains
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pre-mRNA cleavage complex 2 protein Pcf11
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pre-mRNA cleavage complex 2 protein Pcf11 [Danio rerio]
1457 aa protein
accession:NP_001007308.1
pre-mRNA cleavage complex 2 protein Pcf11
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pre-mRNA cleavage complex 2 protein Pcf11 [Mus musculus]
1553 aa protein
accession:NP_083354.3
pre-mRNA cleavage complex 2 protein Pcf11
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pre-mRNA cleavage complex 2 protein Pcf11 [Rattus norvegicus]
1551 aa protein
accession:NP_001414361.1
pre-mRNA cleavage complex 2 protein Pcf11 isoform 4
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pre-mRNA cleavage complex 2 protein Pcf11 isoform 4 [Homo sapiens]
1554 aa protein
accession:NP_001333344.1
Query: Pcf11 cleavage and polyadenylation factor subunit, isoform G
...
Pcf11 cleavage and polyadenylation factor subunit, isoform G [Drosophila melanogaster]
1945 aa protein
accession:NP_001286429.1
Pcf11 cleavage and polyadenylation factor subunit, isoform D
...
Pcf11 cleavage and polyadenylation factor subunit, isoform D [Drosophila melanogaster]
1953 aa protein
accession:NP_610999.4
DOMAINS: and other(s) domains
...
pre-mRNA cleavage complex 2 protein Pcf11 [Danio rerio]
1457 aa protein
accession:NP_001007308.1
pre-mRNA cleavage complex 2 protein Pcf11 [Mus musculus]
1553 aa protein
accession:NP_083354.3
pre-mRNA cleavage complex 2 protein Pcf11 [Rattus norvegicus]
1551 aa protein
accession:NP_001414361.1
pre-mRNA cleavage complex 2 protein Pcf11 isoform 4 [Homo sapiens]
1554 aa protein
accession:NP_001333344.1
Pcf11 cleavage and polyadenylation factor subunit, isoform G [Drosophila melanogaster]
1945 aa protein
accession:NP_001286429.1
Pcf11 cleavage and polyadenylation factor subunit, isoform D [Drosophila melanogaster]
1953 aa protein
accession:NP_610999.4
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 3983 | 3983 | 100% | 0.0 | 99.54% | NP_610999.4 | |
| 2 | 182 | 363 | 37% | 1e-44 | 39.16% | NP_001007308.1 | |
| 3 | 182 | 348 | 33% | 3e-44 | 35.33% | NP_083354.3 | |
| 4 | 179 | 346 | 26% | 1e-43 | 35.46% | NP_001333344.1 | |
| 5 | 177 | 346 | 33% | 4e-43 | 35.81% | NP_001414361.1 |