Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001288661.2 ribosome quality control complex subunit NEMF isoform 2 [Homo sapiens] ... Query length: 1055 aa

Rqc2p ...

Rqc2p [Saccharomyces cerevisiae S288C]

1038 aa protein

accession:NP_015316.1

Alignment Sequence Identical proteins

ribosome quality control complex subunit Rqc2 ...

ribosome quality control complex subunit Rqc2 [Schizosaccharomyces pombe]

1021 aa protein

accession:NP_588145.2

Alignment Sequence Identical proteins

conserved protein, unknown function ...

conserved protein, unknown function [Plasmodium falciparum 3D7]

2180 aa protein

accession:XP_024329146.1

Alignment Sequence Identical proteins

ribosome rescue protein RqcH ...

ribosome rescue protein RqcH [Methanothermobacter]

652 aa protein

accession:WP_048061171.1

Alignment Sequence Identical proteins

Query: ribosome quality control complex subunit NEMF isoform 2 ...

ribosome quality control complex subunit NEMF isoform 2 [Homo sapiens]

1055 aa protein

accession:NP_001288661.2

Sequence Identical proteins

ribosome quality control complex subunit NEMF isoform X1 ...

ribosome quality control complex subunit NEMF isoform X1 [Homo sapiens]

993 aa protein

accession:XP_047287867.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047287867.1\|	ribosome quality control complex subunit NEMF isoform X1 [Homo sapiens]	1930	1930	89%	0.0	97.82%	XP_047287867.1
2 Select seq ref\|NP_588145.2\|	ribosome quality control complex subunit Rqc2 [Schizosaccharomyces pombe]	425	487	74%	6e-131	35.52%	NP_588145.2
3 Select seq ref\|NP_015316.1\|	Rqc2p [Saccharomyces cerevisiae S288C]	277	334	80%	2e-77	29.31%	NP_015316.1
4 Select seq ref\|XP_024329146.1\|	conserved protein, unknown function [Plasmodium falciparum 3D7]	253	472	71%	7e-68	36.76%	XP_024329146.1
5 Select seq ref\|WP_048061171.1\|	ribosome rescue protein RqcH [Methanothermobacter]	214	214	58%	9e-58	29.17%	WP_048061171.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments