Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001289520.1
DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana sylvestris]
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Query length:
1020 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase, mitochondrial isoform 18
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DNA-directed RNA polymerase, mitochondrial isoform 18 [Homo sapiens]
1122 aa protein
accession:NP_001394762.1
DNA-dependent RNA polymerase
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DNA-dependent RNA polymerase [Dictyostelium discoideum AX4]
950 aa protein
accession:XP_647347.1
RNA polymerase Rpo41
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RNA polymerase Rpo41 [Schizosaccharomyces pombe]
1154 aa protein
accession:NP_594459.2
DNA-directed RNA polymerase
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DNA-directed RNA polymerase [Saccharomyces cerevisiae S288C]
1351 aa protein
accession:NP_116617.1
Query: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
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DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana sylvestris]
1020 aa protein
accession:NP_001289520.1
DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial isoform X4
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DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial isoform X4 [Glycine max]
998 aa protein
accession:XP_040874369.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase, mitochondrial isoform 18 [Homo sapiens]
1122 aa protein
accession:NP_001394762.1
DNA-dependent RNA polymerase [Dictyostelium discoideum AX4]
950 aa protein
accession:XP_647347.1
RNA polymerase Rpo41 [Schizosaccharomyces pombe]
1154 aa protein
accession:NP_594459.2
DNA-directed RNA polymerase [Saccharomyces cerevisiae S288C]
1351 aa protein
accession:NP_116617.1
DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana sylvestris]
1020 aa protein
accession:NP_001289520.1
DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial isoform X4 [Glycine max]
998 aa protein
accession:XP_040874369.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1344 | 1344 | 88% | 0.0 | 70.74% | XP_040874369.1 | |
| 2 | 564 | 564 | 82% | 0.0 | 38.13% | XP_647347.1 | |
| 3 | 542 | 542 | 78% | 3e-174 | 37.63% | NP_594459.2 | |
| 4 | 532 | 532 | 75% | 1e-168 | 37.84% | NP_116617.1 | |
| 5 | 498 | 498 | 64% | 7e-158 | 41.51% | NP_001394762.1 |