Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001289708.1
non-homologous end joining factor IFFO1 isoform d [Mus musculus]
...
Query length:
560 aa
DOMAINS: and other(s) domains
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intermediate filament family orphan 2 isoform X2
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intermediate filament family orphan 2 isoform X2 [Danio rerio]
534 aa protein
accession:XP_021329319.1
intermediate filament family orphan 2 isoform 3
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intermediate filament family orphan 2 isoform 3 [Mus musculus]
465 aa protein
accession:NP_001411939.1
Query: non-homologous end joining factor IFFO1 isoform d
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non-homologous end joining factor IFFO1 isoform d [Mus musculus]
560 aa protein
accession:NP_001289708.1
non-homologous end joining factor IFFO1 isoform X7
...
non-homologous end joining factor IFFO1 isoform X7 [Rattus norvegicus]
573 aa protein
accession:XP_063142428.1
non-homologous end joining factor IFFO1 isoform X5
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non-homologous end joining factor IFFO1 isoform X5 [Rattus norvegicus]
383 aa protein
accession:XP_063142426.1
non-homologous end joining factor IFFO1 isoform X4
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non-homologous end joining factor IFFO1 isoform X4 [Rattus norvegicus]
384 aa protein
accession:XP_063142425.1
DOMAINS: and other(s) domains
...
intermediate filament family orphan 2 isoform X2 [Danio rerio]
534 aa protein
accession:XP_021329319.1
intermediate filament family orphan 2 isoform 3 [Mus musculus]
465 aa protein
accession:NP_001411939.1
non-homologous end joining factor IFFO1 isoform d [Mus musculus]
560 aa protein
accession:NP_001289708.1
non-homologous end joining factor IFFO1 isoform X7 [Rattus norvegicus]
573 aa protein
accession:XP_063142428.1
non-homologous end joining factor IFFO1 isoform X5 [Rattus norvegicus]
383 aa protein
accession:XP_063142426.1
non-homologous end joining factor IFFO1 isoform X4 [Rattus norvegicus]
384 aa protein
accession:XP_063142425.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1120 | 1120 | 100% | 0.0 | 96.16% | XP_063142428.1 | |
| 2 | 489 | 489 | 84% | 6e-168 | 53.89% | XP_021329319.1 | |
| 3 | 437 | 437 | 83% | 2e-148 | 54.49% | NP_001411939.1 | |
| 4 | 720 | 720 | 63% | 0.0 | 97.49% | XP_063142426.1 | |
| 5 | 720 | 720 | 63% | 0.0 | 97.49% | XP_063142425.1 |