Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001291778.1 large ribosomal subunit protein uL1 [Ailuropoda melanoleuca] ... Query length: 217 aa

60S ribosomal protein L1, putative ...

60S ribosomal protein L1, putative [Plasmodium falciparum 3D7]

217 aa protein

accession:XP_001348565.1

Alignment Sequence Identical proteins

ribosomal protein L10Ab, isoform A ...

ribosomal protein L10Ab, isoform A [Drosophila melanogaster]

217 aa protein

accession:NP_648514.1

Alignment Sequence Identical proteins

Large ribosomal subunit protein uL1 ...

Large ribosomal subunit protein uL1 [Caenorhabditis elegans]

216 aa protein

accession:NP_491061.1

Alignment Sequence Identical proteins

large ribosomal subunit protein uL1 ...

large ribosomal subunit protein uL1 [Danio rerio]

216 aa protein

accession:NP_955930.1

Alignment Sequence Identical proteins

Query: large ribosomal subunit protein uL1 ...

large ribosomal subunit protein uL1 [Ailuropoda melanoleuca]

217 aa protein

accession:NP_001291778.1

Sequence Identical proteins

large ribosomal subunit protein uL1 isoform 2 ...

large ribosomal subunit protein uL1 isoform 2 [Mus musculus]

133 aa protein

accession:NP_001344557.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_955930.1\|	large ribosomal subunit protein uL1 [Danio rerio]	377	377	99%	2e-133	92.56%	NP_955930.1
2 Select seq ref\|NP_648514.1\|	ribosomal protein L10Ab, isoform A [Drosophila melanogaster]	320	320	100%	2e-111	76.96%	NP_648514.1
3 Select seq ref\|NP_491061.1\|	Large ribosomal subunit protein uL1 [Caenorhabditis elegans]	303	303	99%	2e-104	73.02%	NP_491061.1
4 Select seq ref\|XP_001348565.1\|	60S ribosomal protein L1, putative [Plasmodium falciparum 3D7]	291	291	99%	2e-99	63.26%	XP_001348565.1
5 Select seq ref\|NP_001344557.1\|	large ribosomal subunit protein uL1 isoform 2 [Mus musculus]	268	268	61%	5e-92	100.00%	NP_001344557.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments