Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001294719.1 Nuclear Hormone Receptor family [Caenorhabditis elegans] ... Query length: 477 aa

knirps-like, isoform B ...

knirps-like, isoform B [Drosophila melanogaster]

647 aa protein

accession:NP_001303368.1

Alignment Sequence Identical proteins

peroxisome proliferator-activated receptor delta isoform 2 ...

peroxisome proliferator-activated receptor delta isoform 2 [Mus musculus]

371 aa protein

accession:NP_001398438.1

Alignment Sequence Identical proteins

peroxisome proliferator-activated receptor delta ...

peroxisome proliferator-activated receptor delta [Danio rerio]

496 aa protein

accession:XP_068072611.1

Alignment Sequence Identical proteins

peroxisome proliferator-activated receptor delta isoform X1 ...

peroxisome proliferator-activated receptor delta isoform X1 [Homo sapiens]

441 aa protein

accession:XP_047274871.1

Alignment Sequence Identical proteins

Query: Nuclear Hormone Receptor family ...

Nuclear Hormone Receptor family [Caenorhabditis elegans]

477 aa protein

accession:NP_001294719.1

Sequence Identical proteins

NR LBD domain-containing protein ...

NR LBD domain-containing protein [Caenorhabditis elegans]

326 aa protein

accession:NP_001379883.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001379883.1\|	NR LBD domain-containing protein [Caenorhabditis elegans]	310	310	78%	7e-102	45.33%	NP_001379883.1
2 Select seq ref\|NP_001303368.1\|	knirps-like, isoform B [Drosophila melanogaster]	71.6	71.6	16%	3e-12	40.00%	NP_001303368.1
3 Select seq ref\|NP_001398438.1\|	peroxisome proliferator-activated receptor delta isoform 2 [Mus musculus]	65.1	65.1	21%	2e-10	33.63%	NP_001398438.1
4 Select seq ref\|XP_068072611.1\|	peroxisome proliferator-activated receptor delta [Danio rerio]	65.5	65.5	21%	2e-10	33.62%	XP_068072611.1
5 Select seq ref\|XP_047274871.1\|	peroxisome proliferator-activated receptor delta isoform X1 [Homo sapiens]	63.9	63.9	16%	6e-10	37.97%	XP_047274871.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments